D2AHK8 (D2AHK8_SHIF2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ADA75021.1

Gene names

Name:	gabT EMBL ADA75021.1
Ordered Locus Names:	SFxv_2948 EMBL ADA75021.1

Organism

Shigella flexneri serotype X (strain 2002017) [Complete proteome] [HAMAP] EMBL ADA75021.1

Taxonomic identifier

591020 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella › Shigella flexneri

Protein attributes

Sequence length	375 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADA75021.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2AHK8 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: EB4C01006704BBBA	FASTA	375	40,054
	10 20 30 40 50 60 MLNTGHLHPK VVAAVEAQLK KLSHTCFQVL AYEPYLELCE IMNQKVPGDF AKKTLLVTTG 70 80 90 100 110 120 SEAVENAVKI ARAATKRSGT IAFSGEYHGR THYTLALTGK VNPYSAGMGL MPGHVYRALY 130 140 150 160 170 180 PCPLHGISED DAIASIHRIF KNDAAPEDIA AIMIEPVQGE GGFYAASPAF MQRLRALCDE 190 200 210 220 230 240 HGIMLIADEV QSGAGRTGTL FAMEQMGVAP DLTTFAKSIA GGFPLAGVTG RAEVMDAVAP 250 260 270 280 290 300 GGLGGTYAGN PIACVAALEV LKVFEQENLL QKANDLGQKL KDGLLAIAEK HPEIGDVRGL 310 320 330 340 350 360 GSMIAIELFE DGDHSKPDAK LTAEIVARAR DKGLILLSCG PYYNVLRILV PLTIEDAQIR 370 QGLEIIGQCF DEAKQ

References

[1]

"Emergence of a new multidrug resistance serotype X variant in an epidemic clone of Shigella flexneri." Ye C., Lan R., Xia S., Zhang J., Sun Q., Zhang S., Jing H., Wang L., Li Z., Zhou Z., Zhao A., Cui Z., Cao J., Jin D., Huang L., Wang Y., Luo X., Bai X. , Wang Y., Wang P., Xu Q., Xu J. J. Clin. Microbiol. 48:419-426(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2002017 EMBL ADA75021.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001383 Genomic DNA. Translation: ADA75021.1.
RefSeq	YP_005728314.1. NC_017328.1.
3D structure databases
ProteinModelPortal	D2AHK8.
SMR	D2AHK8. Positions 1-375.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADA75021; ADA75021; SFxv_2948.
GeneID	12318180.
KEGG	sfe:SFxv_2948.
PATRIC	36747785. VBIShiFle60233_3198.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K07250.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2AHK8_SHIF2

Accession

Primary (citable) accession number: D2AHK8

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)