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D2AHK8

- D2AHK8_SHIF2

UniProt

D2AHK8 - D2AHK8_SHIF2

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Shigella flexneri serotype X (strain 2002017)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSFLE591020:GLK5-2884-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Gene namesi
    Name:gabTImported
    Ordered Locus Names:SFxv_2948Imported
    OrganismiShigella flexneri serotype X (strain 2002017)Imported
    Taxonomic identifieri591020 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella
    ProteomesiUP000001884: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2AHK8.
    SMRiD2AHK8. Positions 1-375.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK07250.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2AHK8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLNTGHLHPK VVAAVEAQLK KLSHTCFQVL AYEPYLELCE IMNQKVPGDF    50
    AKKTLLVTTG SEAVENAVKI ARAATKRSGT IAFSGEYHGR THYTLALTGK 100
    VNPYSAGMGL MPGHVYRALY PCPLHGISED DAIASIHRIF KNDAAPEDIA 150
    AIMIEPVQGE GGFYAASPAF MQRLRALCDE HGIMLIADEV QSGAGRTGTL 200
    FAMEQMGVAP DLTTFAKSIA GGFPLAGVTG RAEVMDAVAP GGLGGTYAGN 250
    PIACVAALEV LKVFEQENLL QKANDLGQKL KDGLLAIAEK HPEIGDVRGL 300
    GSMIAIELFE DGDHSKPDAK LTAEIVARAR DKGLILLSCG PYYNVLRILV 350
    PLTIEDAQIR QGLEIIGQCF DEAKQ 375
    Length:375
    Mass (Da):40,054
    Last modified:February 9, 2010 - v1
    Checksum:iEB4C01006704BBBA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001383 Genomic DNA. Translation: ADA75021.1.
    RefSeqiYP_005728314.1. NC_017328.1.

    Genome annotation databases

    EnsemblBacteriaiADA75021; ADA75021; SFxv_2948.
    GeneIDi12318180.
    KEGGisfe:SFxv_2948.
    PATRICi36747785. VBIShiFle60233_3198.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001383 Genomic DNA. Translation: ADA75021.1 .
    RefSeqi YP_005728314.1. NC_017328.1.

    3D structure databases

    ProteinModelPortali D2AHK8.
    SMRi D2AHK8. Positions 1-375.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADA75021 ; ADA75021 ; SFxv_2948 .
    GeneIDi 12318180.
    KEGGi sfe:SFxv_2948.
    PATRICi 36747785. VBIShiFle60233_3198.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K07250.

    Enzyme and pathway databases

    BioCyci SFLE591020:GLK5-2884-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri."
      Ye C., Lan R., Xia S., Zhang J., Sun Q., Zhang S., Jing H., Wang L., Li Z., Zhou Z., Zhao A., Cui Z., Cao J., Jin D., Huang L., Wang Y., Luo X., Bai X.
      , Wang Y., Wang P., Xu Q., Xu J.
      J. Clin. Microbiol. 48:419-426(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2002017Imported.

    Entry informationi

    Entry nameiD2AHK8_SHIF2
    AccessioniPrimary (citable) accession number: D2AHK8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3