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D2AFV0 (D2AFV0_SHIF2) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:glpC EMBL ADA74672.1
Ordered Locus Names:SFxv_2566 EMBL ADA74672.1
OrganismShigella flexneri serotype X (strain 2002017) [Complete proteome] [HAMAP] EMBL ADA74672.1
Taxonomic identifier591020 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functioniron-sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2AFV0 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 00592033373A8335

FASTA39644,122
        10         20         30         40         50         60 
MNDTSFENCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK 

        70         80         90        100        110        120 
RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFVLSHTDL MGSVSTPFAP IVNTATSLKP 

       130        140        150        160        170        180 
VRQLLDAALK IDHRRTLPKY SFGTFRRWYR SIAAQQAQYK DQVAFFHGCF VNYNHPQLGK 

       190        200        210        220        230        240 
DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI TNVESIREAV GVKGIPVIAT 

       250        260        270        280        290        300 
SSTCTFALRD EYPEVLNVDN KGLRDHIELA TRWLWRKLDE GKTLPLKPLP LKVVYHTPCH 

       310        320        330        340        350        360 
MEKMGWTLYT LELLRNIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQAIG APLFRQIEES 

       370        380        390 
GADLVVTDCE TCKWQIEMST SLRCEHPITL LAQALA 

« Hide

References

[1]"Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri."
Ye C., Lan R., Xia S., Zhang J., Sun Q., Zhang S., Jing H., Wang L., Li Z., Zhou Z., Zhao A., Cui Z., Cao J., Jin D., Huang L., Wang Y., Luo X., Bai X. expand/collapse author list , Wang Y., Wang P., Xu Q., Xu J.
J. Clin. Microbiol. 48:419-426(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2002017 EMBL ADA74672.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001383 Genomic DNA. Translation: ADA74672.1.
RefSeqYP_005727965.1. NC_017328.1.

3D structure databases

ProteinModelPortalD2AFV0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADA74672; ADA74672; SFxv_2566.
GeneID12319101.
KEGGsfe:SFxv_2566.
PATRIC36746931. VBIShiFle60233_2786.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000278500.
KOK00113.

Enzyme and pathway databases

BioCycSFLE591020:GLK5-2509-MONOMER.

Family and domain databases

InterProIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR004017. Cys_rich_dom.
IPR017753. G3P_DH_GlpC_su.
IPR009051. Helical_ferredxn.
[Graphical view]
PfamPF02754. CCG. 2 hits.
PF13183. Fer4_8. 1 hit.
[Graphical view]
SUPFAMSSF46548. SSF46548. 1 hit.
TIGRFAMsTIGR03379. glycerol3P_GlpC. 1 hit.
PROSITEPS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2AFV0_SHIF2
AccessionPrimary (citable) accession number: D2AFV0
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: December 11, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)