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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Shigella flexneri serotype X (strain 2002017)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotationImported
Ordered Locus Names:SFxv_3582Imported
OrganismiShigella flexneri serotype X (strain 2002017)Imported
Taxonomic identifieri591020 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000001884 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliD2A8T5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000225286.
KOiK02871.
OMAiVLMGKHK.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

D2A8T5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFGCSPTC NYLLGKLLMK TFTAKPETVK RDWYVVDATG KTLGRLATEL
60 70 80 90 100
ARRLRGKHKA EYTPHVDTGD YIIVLNADKV AVTGNKRTDK VYYHHTGHIG
110 120 130 140 150
GIKQATFEEM IARRPERVIE IAVKGMLPKG PLGRAMFRKL KVYAGNEHNH
160
AAQQPQVLDI
Length:160
Mass (Da):17,990
Last modified:February 9, 2010 - v1
Checksum:i810DF7097641A879
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001383 Genomic DNA. Translation: ADA75594.1.

Genome annotation databases

EnsemblBacteriaiADA75594; ADA75594; SFxv_3582.
KEGGisfe:SFxv_3582.
PATRICifig|591020.3.peg.3857.

Similar proteinsi

Entry informationi

Entry nameiD2A8T5_SHIF2
AccessioniPrimary (citable) accession number: D2A8T5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: September 27, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported