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D2A4V3

- D2A4V3_TRICA

UniProt

D2A4V3 - D2A4V3_TRICA

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Protein
Submitted name: Putative uncharacterized protein GLEAN_15300
Gene
GLEAN_15300, TcasGA2_TC015300
Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. snRNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein GLEAN_15300Imported
Gene namesi
Name:GLEAN_15300Imported
ORF Names:TcasGA2_TC015300Imported
OrganismiTribolium castaneum (Red flour beetle)
Taxonomic identifieri7070 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
ProteomesiUP000007266: Linkage group 6

Subcellular locationi

GO - Cellular componenti

  1. integrator complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

OMAiIFQGVIG.
OrthoDBiEOG722J7N.
PhylomeDBiD2A4V3.

Family and domain databases

InterProiIPR026236. Int2_metazoa.
IPR029321. INTS2.
[Graphical view]
PfamiPF14750. INTS2. 1 hit.
[Graphical view]
PRINTSiPR02105. INTSUBUNIT2.

Sequencei

Sequence statusi: Complete.

D2A4V3-1 [UniParc]FASTAAdd to Basket

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MSFKKGVDPK VFRAIQNVDM HQLSECTEVE IRPVLPCLVR MGLISPLDTS     50
KKCTTMKVDI LTIVSGMELV NSIVALLSID FHRLETEVKK EQQLRQKGVA 100
LQNDSILIGN LSNTSMALEY ERSDMTRRLS ILLGELLYVQ SQIQDENSDT 150
SYIKPSELFD NDIFAEELSD IICIALAELP ITLNILTITE TLLHLHNGPP 200
IICRIVANFP DCFREVCTYL IQTGEKQEET KLSTVRAATI SLLCKMNPSQ 250
ALTIRSKCVE LCRMPALAIT LSLDGGEGDM VAFISGLLLG NDQTIRNWIA 300
LFIRTGQKKK GEISSTALLQ LREELLRRLH VILAASVEGH LLDSLVVQGS 350
ALLRLYCALR GIAAIKFQED EVTALVRLLT SHPSPTPAGV RFVSIGLCML 400
IACPSLISLQ EHERRSIEWV QWLVKEEAYF ESASGVTASF GEMLLLMAIH 450
FHSNQLSAIC DLVCATLGMK IPIRHNNMTR MKQVFTQEIF TEQVVTAHAV 500
KVPVTNSLSA NMTGFLPIHC IHQLLKSRAF AKHNVNIKNW IYKQICTSVS 550
PLHPVLPMLV EVYVNSVIMP TSRNTETNKP LSENEIRRVF QSSIFGQYFD 600
HKKSIFTMDF DLNSENQDVV VDGTSLTPQL LLLYYLLLYE DCRLVNAHIL 650
AAFNRKIKLY SSEFLSELPI KYLLHHAQKD QSSYSGLFGP LLKLLATHFP 700
HLTLVEDWLD DMSIKTEHKP THVTQISVIE AFNDLDTNPS KCAKLMQTLL 750
KQQAIDIWPF AEIFTQFARK ILNDNVPRYL QDLYRDVWLR FNTVLPRRLW 800
VLTVKNLVDD FSNLTRIDVA EDPLQIMRCD ERVFRCAPLY AIVLRVLRAS 850
LASSRSQLMQ HLQANPRLDH AGQVLNESDR EEMCRATIAA QESAAVQMLL 900
ETCIETDEDR TIGGQKWALQ EVRSLVCSYL HQVFIADTML AKLVHFQGYP 950
SELIEVMVKG VPSMHICLDF LQELMQQPSL DKQIFAIQLL SHLCIQYALP 1000
KSLNLCVAAL NLLYALLGSL SSSQRVRLFR PILPALVRIS EAFPPLVDDI 1050
VNLMMQLAKV CKSQASLASH FDVHLGKELE VSAEESKELC VLVQETFSDI 1100
LDRAVFKSKI YKQE 1114
Length:1,114
Mass (Da):125,874
Last modified:February 9, 2010 - v1
Checksum:i26C2524395FC5818
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000281 Genomic DNA. Translation: EFA05171.1.

Genome annotation databases

EnsemblMetazoaiTCOGS2:TC015300-RA; TCOGS2:TC015300-PA; TCOGS2:TC015300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000281 Genomic DNA. Translation: EFA05171.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai TCOGS2:TC015300-RA ; TCOGS2:TC015300-PA ; TCOGS2:TC015300 .

Phylogenomic databases

OMAi IFQGVIG.
OrthoDBi EOG722J7N.
PhylomeDBi D2A4V3.

Family and domain databases

InterProi IPR026236. Int2_metazoa.
IPR029321. INTS2.
[Graphical view ]
Pfami PF14750. INTS2. 1 hit.
[Graphical view ]
PRINTSi PR02105. INTSUBUNIT2.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the model beetle and pest Tribolium castaneum."
    Tribolium Genome Sequencing Consortium
    Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
    , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
    Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Georgia GA2Imported.
  2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
    Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
    Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: Georgia GA2Imported.

Entry informationi

Entry nameiD2A4V3_TRICA
AccessioniPrimary (citable) accession number: D2A4V3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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