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D2A4V3

- D2A4V3_TRICA

UniProt

D2A4V3 - D2A4V3_TRICA

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Protein
Submitted name:

Putative uncharacterized protein GLEAN_15300

Gene

GLEAN_15300

Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. snRNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein GLEAN_15300Imported
Gene namesi
Name:GLEAN_15300Imported
ORF Names:TcasGA2_TC015300Imported
OrganismiTribolium castaneum (Red flour beetle)Imported
Taxonomic identifieri7070 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
ProteomesiUP000007266: Linkage group 6

Subcellular locationi

GO - Cellular componenti

  1. integrator complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

InParanoidiD2A4V3.
OMAiIFQGVIG.
OrthoDBiEOG722J7N.
PhylomeDBiD2A4V3.

Family and domain databases

InterProiIPR026236. Int2_metazoa.
IPR029321. INTS2.
[Graphical view]
PfamiPF14750. INTS2. 1 hit.
[Graphical view]
PRINTSiPR02105. INTSUBUNIT2.

Sequencei

Sequence statusi: Complete.

D2A4V3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFKKGVDPK VFRAIQNVDM HQLSECTEVE IRPVLPCLVR MGLISPLDTS
60 70 80 90 100
KKCTTMKVDI LTIVSGMELV NSIVALLSID FHRLETEVKK EQQLRQKGVA
110 120 130 140 150
LQNDSILIGN LSNTSMALEY ERSDMTRRLS ILLGELLYVQ SQIQDENSDT
160 170 180 190 200
SYIKPSELFD NDIFAEELSD IICIALAELP ITLNILTITE TLLHLHNGPP
210 220 230 240 250
IICRIVANFP DCFREVCTYL IQTGEKQEET KLSTVRAATI SLLCKMNPSQ
260 270 280 290 300
ALTIRSKCVE LCRMPALAIT LSLDGGEGDM VAFISGLLLG NDQTIRNWIA
310 320 330 340 350
LFIRTGQKKK GEISSTALLQ LREELLRRLH VILAASVEGH LLDSLVVQGS
360 370 380 390 400
ALLRLYCALR GIAAIKFQED EVTALVRLLT SHPSPTPAGV RFVSIGLCML
410 420 430 440 450
IACPSLISLQ EHERRSIEWV QWLVKEEAYF ESASGVTASF GEMLLLMAIH
460 470 480 490 500
FHSNQLSAIC DLVCATLGMK IPIRHNNMTR MKQVFTQEIF TEQVVTAHAV
510 520 530 540 550
KVPVTNSLSA NMTGFLPIHC IHQLLKSRAF AKHNVNIKNW IYKQICTSVS
560 570 580 590 600
PLHPVLPMLV EVYVNSVIMP TSRNTETNKP LSENEIRRVF QSSIFGQYFD
610 620 630 640 650
HKKSIFTMDF DLNSENQDVV VDGTSLTPQL LLLYYLLLYE DCRLVNAHIL
660 670 680 690 700
AAFNRKIKLY SSEFLSELPI KYLLHHAQKD QSSYSGLFGP LLKLLATHFP
710 720 730 740 750
HLTLVEDWLD DMSIKTEHKP THVTQISVIE AFNDLDTNPS KCAKLMQTLL
760 770 780 790 800
KQQAIDIWPF AEIFTQFARK ILNDNVPRYL QDLYRDVWLR FNTVLPRRLW
810 820 830 840 850
VLTVKNLVDD FSNLTRIDVA EDPLQIMRCD ERVFRCAPLY AIVLRVLRAS
860 870 880 890 900
LASSRSQLMQ HLQANPRLDH AGQVLNESDR EEMCRATIAA QESAAVQMLL
910 920 930 940 950
ETCIETDEDR TIGGQKWALQ EVRSLVCSYL HQVFIADTML AKLVHFQGYP
960 970 980 990 1000
SELIEVMVKG VPSMHICLDF LQELMQQPSL DKQIFAIQLL SHLCIQYALP
1010 1020 1030 1040 1050
KSLNLCVAAL NLLYALLGSL SSSQRVRLFR PILPALVRIS EAFPPLVDDI
1060 1070 1080 1090 1100
VNLMMQLAKV CKSQASLASH FDVHLGKELE VSAEESKELC VLVQETFSDI
1110
LDRAVFKSKI YKQE
Length:1,114
Mass (Da):125,874
Last modified:February 9, 2010 - v1
Checksum:i26C2524395FC5818
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000281 Genomic DNA. Translation: EFA05171.1.
RefSeqiXP_008194516.1. XM_008196294.1.

Genome annotation databases

EnsemblMetazoaiTC015300-RA; TC015300-PA; TC015300.
GeneIDi661595.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000281 Genomic DNA. Translation: EFA05171.1 .
RefSeqi XP_008194516.1. XM_008196294.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai TC015300-RA ; TC015300-PA ; TC015300 .
GeneIDi 661595.

Phylogenomic databases

InParanoidi D2A4V3.
OMAi IFQGVIG.
OrthoDBi EOG722J7N.
PhylomeDBi D2A4V3.

Family and domain databases

InterProi IPR026236. Int2_metazoa.
IPR029321. INTS2.
[Graphical view ]
Pfami PF14750. INTS2. 1 hit.
[Graphical view ]
PRINTSi PR02105. INTSUBUNIT2.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the model beetle and pest Tribolium castaneum."
    Tribolium Genome Sequencing Consortium
    Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
    , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
    Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Georgia GA2Imported.
  2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
    Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
    Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: Georgia GA2Imported.

Entry informationi

Entry nameiD2A4V3_TRICA
AccessioniPrimary (citable) accession number: D2A4V3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 29, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3