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D2A4V3 (D2A4V3_TRICA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:GLEAN_15300 EMBL EFA05171.1
ORF Names:TcasGA2_TC015300 EMBL EFA05171.1
OrganismTribolium castaneum (Red flour beetle) [Complete proteome]
Taxonomic identifier7070 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium

Protein attributes

Sequence length1114 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsnRNA processing

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegrator complex

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2A4V3 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 26C2524395FC5818

FASTA1,114125,874
        10         20         30         40         50         60 
MSFKKGVDPK VFRAIQNVDM HQLSECTEVE IRPVLPCLVR MGLISPLDTS KKCTTMKVDI 

        70         80         90        100        110        120 
LTIVSGMELV NSIVALLSID FHRLETEVKK EQQLRQKGVA LQNDSILIGN LSNTSMALEY 

       130        140        150        160        170        180 
ERSDMTRRLS ILLGELLYVQ SQIQDENSDT SYIKPSELFD NDIFAEELSD IICIALAELP 

       190        200        210        220        230        240 
ITLNILTITE TLLHLHNGPP IICRIVANFP DCFREVCTYL IQTGEKQEET KLSTVRAATI 

       250        260        270        280        290        300 
SLLCKMNPSQ ALTIRSKCVE LCRMPALAIT LSLDGGEGDM VAFISGLLLG NDQTIRNWIA 

       310        320        330        340        350        360 
LFIRTGQKKK GEISSTALLQ LREELLRRLH VILAASVEGH LLDSLVVQGS ALLRLYCALR 

       370        380        390        400        410        420 
GIAAIKFQED EVTALVRLLT SHPSPTPAGV RFVSIGLCML IACPSLISLQ EHERRSIEWV 

       430        440        450        460        470        480 
QWLVKEEAYF ESASGVTASF GEMLLLMAIH FHSNQLSAIC DLVCATLGMK IPIRHNNMTR 

       490        500        510        520        530        540 
MKQVFTQEIF TEQVVTAHAV KVPVTNSLSA NMTGFLPIHC IHQLLKSRAF AKHNVNIKNW 

       550        560        570        580        590        600 
IYKQICTSVS PLHPVLPMLV EVYVNSVIMP TSRNTETNKP LSENEIRRVF QSSIFGQYFD 

       610        620        630        640        650        660 
HKKSIFTMDF DLNSENQDVV VDGTSLTPQL LLLYYLLLYE DCRLVNAHIL AAFNRKIKLY 

       670        680        690        700        710        720 
SSEFLSELPI KYLLHHAQKD QSSYSGLFGP LLKLLATHFP HLTLVEDWLD DMSIKTEHKP 

       730        740        750        760        770        780 
THVTQISVIE AFNDLDTNPS KCAKLMQTLL KQQAIDIWPF AEIFTQFARK ILNDNVPRYL 

       790        800        810        820        830        840 
QDLYRDVWLR FNTVLPRRLW VLTVKNLVDD FSNLTRIDVA EDPLQIMRCD ERVFRCAPLY 

       850        860        870        880        890        900 
AIVLRVLRAS LASSRSQLMQ HLQANPRLDH AGQVLNESDR EEMCRATIAA QESAAVQMLL 

       910        920        930        940        950        960 
ETCIETDEDR TIGGQKWALQ EVRSLVCSYL HQVFIADTML AKLVHFQGYP SELIEVMVKG 

       970        980        990       1000       1010       1020 
VPSMHICLDF LQELMQQPSL DKQIFAIQLL SHLCIQYALP KSLNLCVAAL NLLYALLGSL 

      1030       1040       1050       1060       1070       1080 
SSSQRVRLFR PILPALVRIS EAFPPLVDDI VNLMMQLAKV CKSQASLASH FDVHLGKELE 

      1090       1100       1110 
VSAEESKELC VLVQETFSDI LDRAVFKSKI YKQE 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the model beetle and pest Tribolium castaneum."
Tribolium Genome Sequencing Consortium
Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D. expand/collapse author list , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Georgia GA2 EMBL EFA05171.1.
[2]"BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Georgia GA2 EMBL EFA05171.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000281 Genomic DNA. Translation: EFA05171.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaTCOGS2:TC015300-RA; TCOGS2:TC015300-PA; TCOGS2:TC015300.

Phylogenomic databases

OMAIFQGVIG.
OrthoDBEOG722J7N.
PhylomeDBD2A4V3.

Family and domain databases

InterProIPR026236. Int2_metazoa.
IPR029321. INTS2.
[Graphical view]
PfamPF14750. INTS2. 1 hit.
[Graphical view]
PRINTSPR02105. INTSUBUNIT2.
ProtoNetSearch...

Entry information

Entry nameD2A4V3_TRICA
AccessionPrimary (citable) accession number: D2A4V3
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)