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D2A4V3

- D2A4V3_TRICA

UniProt

D2A4V3 - D2A4V3_TRICA

Protein
Submitted name:

Putative uncharacterized protein GLEAN_15300

Gene

GLEAN_15300

Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. snRNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein GLEAN_15300Imported
    Gene namesi
    Name:GLEAN_15300Imported
    ORF Names:TcasGA2_TC015300Imported
    OrganismiTribolium castaneum (Red flour beetle)Imported
    Taxonomic identifieri7070 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
    ProteomesiUP000007266: Linkage group 6

    Subcellular locationi

    GO - Cellular componenti

    1. integrator complex Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    OMAiIFQGVIG.
    OrthoDBiEOG722J7N.
    PhylomeDBiD2A4V3.

    Family and domain databases

    InterProiIPR026236. Int2_metazoa.
    IPR029321. INTS2.
    [Graphical view]
    PfamiPF14750. INTS2. 1 hit.
    [Graphical view]
    PRINTSiPR02105. INTSUBUNIT2.

    Sequencei

    Sequence statusi: Complete.

    D2A4V3-1 [UniParc]FASTAAdd to Basket

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    MSFKKGVDPK VFRAIQNVDM HQLSECTEVE IRPVLPCLVR MGLISPLDTS     50
    KKCTTMKVDI LTIVSGMELV NSIVALLSID FHRLETEVKK EQQLRQKGVA 100
    LQNDSILIGN LSNTSMALEY ERSDMTRRLS ILLGELLYVQ SQIQDENSDT 150
    SYIKPSELFD NDIFAEELSD IICIALAELP ITLNILTITE TLLHLHNGPP 200
    IICRIVANFP DCFREVCTYL IQTGEKQEET KLSTVRAATI SLLCKMNPSQ 250
    ALTIRSKCVE LCRMPALAIT LSLDGGEGDM VAFISGLLLG NDQTIRNWIA 300
    LFIRTGQKKK GEISSTALLQ LREELLRRLH VILAASVEGH LLDSLVVQGS 350
    ALLRLYCALR GIAAIKFQED EVTALVRLLT SHPSPTPAGV RFVSIGLCML 400
    IACPSLISLQ EHERRSIEWV QWLVKEEAYF ESASGVTASF GEMLLLMAIH 450
    FHSNQLSAIC DLVCATLGMK IPIRHNNMTR MKQVFTQEIF TEQVVTAHAV 500
    KVPVTNSLSA NMTGFLPIHC IHQLLKSRAF AKHNVNIKNW IYKQICTSVS 550
    PLHPVLPMLV EVYVNSVIMP TSRNTETNKP LSENEIRRVF QSSIFGQYFD 600
    HKKSIFTMDF DLNSENQDVV VDGTSLTPQL LLLYYLLLYE DCRLVNAHIL 650
    AAFNRKIKLY SSEFLSELPI KYLLHHAQKD QSSYSGLFGP LLKLLATHFP 700
    HLTLVEDWLD DMSIKTEHKP THVTQISVIE AFNDLDTNPS KCAKLMQTLL 750
    KQQAIDIWPF AEIFTQFARK ILNDNVPRYL QDLYRDVWLR FNTVLPRRLW 800
    VLTVKNLVDD FSNLTRIDVA EDPLQIMRCD ERVFRCAPLY AIVLRVLRAS 850
    LASSRSQLMQ HLQANPRLDH AGQVLNESDR EEMCRATIAA QESAAVQMLL 900
    ETCIETDEDR TIGGQKWALQ EVRSLVCSYL HQVFIADTML AKLVHFQGYP 950
    SELIEVMVKG VPSMHICLDF LQELMQQPSL DKQIFAIQLL SHLCIQYALP 1000
    KSLNLCVAAL NLLYALLGSL SSSQRVRLFR PILPALVRIS EAFPPLVDDI 1050
    VNLMMQLAKV CKSQASLASH FDVHLGKELE VSAEESKELC VLVQETFSDI 1100
    LDRAVFKSKI YKQE 1114
    Length:1,114
    Mass (Da):125,874
    Last modified:February 9, 2010 - v1
    Checksum:i26C2524395FC5818
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000281 Genomic DNA. Translation: EFA05171.1.

    Genome annotation databases

    EnsemblMetazoaiTCOGS2:TC015300-RA; TCOGS2:TC015300-PA; TCOGS2:TC015300.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000281 Genomic DNA. Translation: EFA05171.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai TCOGS2:TC015300-RA ; TCOGS2:TC015300-PA ; TCOGS2:TC015300 .

    Phylogenomic databases

    OMAi IFQGVIG.
    OrthoDBi EOG722J7N.
    PhylomeDBi D2A4V3.

    Family and domain databases

    InterProi IPR026236. Int2_metazoa.
    IPR029321. INTS2.
    [Graphical view ]
    Pfami PF14750. INTS2. 1 hit.
    [Graphical view ]
    PRINTSi PR02105. INTSUBUNIT2.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the model beetle and pest Tribolium castaneum."
      Tribolium Genome Sequencing Consortium
      Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
      , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
      Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Georgia GA2Imported.
    2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
      Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
      Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: Georgia GA2Imported.

    Entry informationi

    Entry nameiD2A4V3_TRICA
    AccessioniPrimary (citable) accession number: D2A4V3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3