Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

MCP_2125

Organism
Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciMPAL304371:GI7G-2173-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MCP_2125Imported
OrganismiMethanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE)Imported
Taxonomic identifieri304371 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000001882 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi304371.MCP_2125.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiEEEPRIM.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D1Z0H5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEVLHIEGH DIKVTNPDKV LFPEDGITKG ELVDYYRRIS GVMVPLVRGR
60 70 80 90 100
PMTMQRFPDG IGKEGFFQKE ASDYFPDWVH RATLELGKGG IQHQVVCDDA
110 120 130 140 150
ATLVYLASQA MITPHVFLSR IDKVHYPDRL IFDLDPPDNN FETVRSAAKT
160 170 180 190 200
IREALDAEGY PVYLMTTGSR GLHVVVPLDR SADFDTVRAF ARGFGEKLTK
210 220 230 240 250
KYPDRFTIEL SKEKRRGRLF LDYLRNSYGQ TGVAPYGVRA RSGAPVATPI
260 270 280 290
TWDELDDISG SQEYNIRNIM GRMDKRGDAW KYIDKDRTSI KNLDN
Length:295
Mass (Da):33,525
Last modified:February 9, 2010 - v1
Checksum:i17A2962696A018F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011532 Genomic DNA. Translation: BAI62197.1.
RefSeqiWP_012900871.1. NC_013665.1.
YP_003357180.1. NC_013665.1.

Genome annotation databases

EnsemblBacteriaiBAI62197; BAI62197; MCP_2125.
GeneIDi8681974.
KEGGimpd:MCP_2125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011532 Genomic DNA. Translation: BAI62197.1.
RefSeqiWP_012900871.1. NC_013665.1.
YP_003357180.1. NC_013665.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi304371.MCP_2125.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAI62197; BAI62197; MCP_2125.
GeneIDi8681974.
KEGGimpd:MCP_2125.

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiEEEPRIM.

Enzyme and pathway databases

BioCyciMPAL304371:GI7G-2173-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella paludicola, the first cultivated representative of the order Methanocellales."
    Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H., Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R., Mori K., Fujita N., Imachi H., Takai K.
    PLoS ONE 6:E22898-E22898(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17711 / JCM 13418 / NBRC 101707 / SANAEImported.

Entry informationi

Entry nameiD1Z0H5_METPS
AccessioniPrimary (citable) accession number: D1Z0H5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: July 22, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.