D1PUB0 (D1PUB0_9BACT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cyclomaltodextrin glucanotransferase EMBL EFA45022.1
EC=2.4.1.19 EMBL EFA45022.1

Gene names

ORF Names:

HMPREF0645_0545 EMBL EFA45022.1

Organism

Prevotella bergensis DSM 17361 EMBL EFA45022.1

Taxonomic identifier

585502 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Prevotellaceae › Prevotella › Prevotella bergensis

Protein attributes

Sequence length	639 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Molecular function	Glycosyltransferase EMBL EFA45022.1 Transferase
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	cation binding Inferred from electronic annotation. Source: InterPro cyclomaltodextrin glucanotransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D1PUB0 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 0547A0D449369938	FASTA	639	73,077
	10 20 30 40 50 60 MKKVIFIFCL LMLAFCMNAK VKITRIDPTD WYVGMQDASL QLMFYGNDLQ GADVTTDYAG 70 80 90 100 110 120 VSVDSVVSLP NTHYLLAYLN LRDVKPGTMT LKLTKGKNTT KVQYMLKERE MSGDKRMGFT 130 140 150 160 170 180 NADVLYMLMP DRFANGNGKN DQIKGMNTYV CDRTKPSLRH GGDLEGIRRH LDYFNQLGVT 190 200 210 220 230 240 ALWFTPVLEN NSPDDHGFST YHGYATTDYY RVDPRFGTNE EYRRLIDEAH QKGLKVVMDM 250 260 270 280 290 300 IFNHCGLEHP WIDEIPSPDW FNYPDWLGER SNTGRNMQTG LPDGTEAKSK YLQTSYKLTP 310 320 330 340 350 360 VLDSYASKVD MKETVDGWFV PSMPDLNQRN PHVIKYLIQN SIWWIETVGI DGIRMDTYPY 370 380 390 400 410 420 ADRQAMAEWM KTLDTEYPNF NVVGETWVTE PPYTAAWQKD SKLSEVNSYL KSVMDFSFFE 430 440 450 460 470 480 KINKAKNEET DDWWEGFNRI YNSLVYDYLY PNPSSVMAFI ENHDTDRFLG NGQDVPALKQ 490 500 510 520 530 540 ALALLLTINR TPQLYYGTEV LMNGTKEVTD GNVRKDFPGG FPGDARNCFT AEGRTKAENE 550 560 570 580 590 600 MFNWLSNVLH WRKDNSVITQ GSQTQFIPYG GIYVIARQHN DKTVLTVLNG KSSEATMTVK 610 620 630 RYAEVIGKHT SAKDILTGQA VDLTKDIPMK GCGVMILEF

References

[1]

Qin X., Bachman B., Battles P., Bell A., Bess C., Bickham C., Chaboub L., Chen D., Coyle M., Deiros D.R., Dinh H., Forbes L., Fowler G., Francisco L., Fu Q., Gubbala S., Hale W., Han Y. , Hemphill L., Highlander S.K., Hirani K., Hogues M., Jackson L., Jakkamsetti A., Javaid M., Jiang H., Korchina V., Kovar C., Lara F., Lee S., Mata R., Mathew T., Moen C., Morales K., Munidasa M., Nazareth L., Ngo R., Nguyen L., Okwuonu G., Ongeri F., Patil S., Petrosino J., Pham C., Pham P., Pu L.-L., Puazo M., Raj R., Reid J., Rouhana J., Saada N., Shang Y., Simmons D., Thornton R., Warren J., Weissenberger G., Zhang J., Zhang L., Zhou C., Zhu D., Muzny D., Worley K., Gibbs R. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 17361 EMBL EFA45022.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ACKS01000025 Genomic DNA. Translation: EFA45022.1.
3D structure databases
ProteinModelPortal	D1PUB0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EFA45022; EFA45022; HMPREF0645_0545.
Family and domain databases
Gene3D	2.60.40.10. 1 hit. 2.60.40.1180. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR015171. Cyc-maltodext_N. IPR019492. Cyclo-malto-dextrinase_C. IPR015902. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
PANTHER	PTHR10357. PTHR10357. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF10438. Cyc-maltodext_C. 1 hit. PF09087. Cyc-maltodext_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D1PUB0_9BACT

Accession

Primary (citable) accession number: D1PUB0

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)