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Protein

Ribonuclease R

Gene

vacB

Organism
Mycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotationSAAS annotation

GO - Molecular functioni

Keywordsi

Molecular functionExonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease, RNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease RUniRule annotation (EC:3.1.13.1UniRule annotation)
Short name:
RNase RUniRule annotation
Gene namesi
Name:vacBImported
Synonyms:rnrUniRule annotation
Ordered Locus Names:MHO_1900Imported
OrganismiMycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)Imported
Taxonomic identifieri347256 [NCBI]
Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma
Proteomesi
  • UP000002631 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi347256.MHO_1900.

Structurei

3D structure databases

ProteinModelPortaliD1J7X7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RNR ribonuclease family. RNase R subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C40. Bacteria.
COG0557. LUCA.
HOGENOMiHOG000071119.
KOiK12573.
OMAiDWYEYRS.
OrthoDBiPOG091H0219.

Family and domain databases

HAMAPiMF_01895. RNase_R. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR022966. RNase_II/R_CS.
IPR004476. RNase_II/RNase_R.
IPR011805. RNase_R.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00358. 3_prime_RNase. 1 hit.
TIGR02063. RNase_R. 1 hit.
PROSITEiView protein in PROSITE
PS01175. RIBONUCLEASE_II. 1 hit.

Sequencei

Sequence statusi: Complete.

D1J7X7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYIKNFKNK NNNPKINEEQ VLKCIRESDG ITFIEIAKKL RIPAFLNFEL
60 70 80 90 100
SEILNNYLSK KLIDTKSDEK YIAIYFLTKV QKEISITAKR LGFIDFEMQE
110 120 130 140 150
ESQTKVFSAF LAPFQLKAVL DKDLLLANIY YYYENGIKKY KGDIIQILNH
160 170 180 190 200
ARKTIVGTIE KSANKLFFNA YDEKDRAKFE IINEKECPDI TKLKNSLVSC
210 220 230 240 250
EILKPNNKKV AIAYKNIIGN INDKEHVIKK IIAQNDVNVN FPQNLLEYVS
260 270 280 290 300
SIPSFVSQEE INSRINLIDL MTVTIDGLDT KDFDDAISCY KNEKNNWKLF
310 320 330 340 350
IHIADVSYYV KENDLIDNEA LLRGTSIYLP DRVIPMLPVE LSNGICSLNP
360 370 380 390 400
NEVRACITLE LEIDKQGNNI SYKIYPSVIK SNYRLTYNEV NDFYSNIKSV
410 420 430 440 450
PDDVANMLLH ARDLAKIIRS KKISEGYVDF EIQESKVIMD GTKVVDIKVK
460 470 480 490 500
EEGESEKLIE DFMVRANETV AQMMTNLKIP SIYRIHEKPS PEKLTLLQEL
510 520 530 540 550
FNFCGFKDVK VPYDGEPKSF GEMIAKLKEH KFDDFIKMAL LRTMQKAIYS
560 570 580 590 600
SNNIGHFGLA SKAYSHFTSP IRRYPDLLLH RLIRTYIFEK KEITPDLSET
610 620 630 640 650
LKQKISQIAL MNSESEKNAM VVERSVVDVR KSEFFENLIN KQFFATLVSI
660 670 680 690 700
EKFGMFFNID EYQTSVLVRF ENLTIPTNKD NDFQASSKNK IYKAGNKYLI
710
TITSIDHEKG NVNATLA
Length:717
Mass (Da):82,725
Last modified:January 19, 2010 - v1
Checksum:iF245777DD3CC1644
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP236530 Genomic DNA. Translation: CAX37324.1.
RefSeqiWP_012855467.1. NC_013511.1.

Genome annotation databases

EnsemblBacteriaiCAX37324; CAX37324; MHO_1900.
GeneIDi25040177.
KEGGimho:MHO_1900.

Similar proteinsi

Entry informationi

Entry nameiD1J7X7_MYCHP
AccessioniPrimary (citable) accession number: D1J7X7
Entry historyiIntegrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: September 27, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported