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D1CIF9 (D1CIF9_THET1) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084

Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:Tter_2642 EMBL ACZ43530.1
OrganismThermobaculum terrenum (strain ATCC BAA-798 / YNP1) [Complete proteome] [HAMAP] EMBL ACZ43530.1
Taxonomic identifier525904 [NCBI]
Taxonomic lineageBacteriaThermobaculum

Protein attributes

Sequence length669 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1531Proton donor By similarity
Active site3041Nucleophile By similarity
Metal binding1181Zinc By similarity PIRSR PIRSR001084-3
Metal binding1581Zinc By similarity PIRSR PIRSR001084-3
Metal binding1601Zinc By similarity PIRSR PIRSR001084-3
Metal binding1631Zinc By similarity PIRSR PIRSR001084-3
Binding site1141Substrate By similarity PIRSR PIRSR001084-2
Binding site1521Substrate By similarity PIRSR PIRSR001084-2
Binding site3121Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
D1CIF9 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 903D6B39CA30DEF9

FASTA66976,705
        10         20         30         40         50         60 
MYGPINPKAP FIWHGGDYNP EQWPPEVWVE DVRLMQEAHY NVPTVGVFSW VSLQPDEHTW 

        70         80         90        100        110        120 
DFEWLDRVLE MLHASGRYFV LATPTAAQPA WMSQRYPDVL RADNTGRRHH HGRRVNYCPN 

       130        140        150        160        170        180 
SPNYRRFIRE VASRLAQRYG GHPGLLAWHV SNEYGGTCMC EVCAEAFRAW LRRRYGSLEE 

       190        200        210        220        230        240 
VNRSWWTRFW GHTYTDWSQI TPPYANGENL THGLTIDYKR FQSEAMLECF KIERDAIREH 

       250        260        270        280        290        300 
SPDVPVTTNL MGTYPLLDYR EWAKEMDVVS WDCYPWPTAD PGDIAFLHDL NRGLKDGRPF 

       310        320        330        340        350        360 
ILMEQTPSSQ NWQPVNQLKR PGVLRLWSYL AVAHGAETVM YFQWRRGRGG CEKFHGAVVE 

       370        380        390        400        410        420 
HHGRTDARVF REVSELGAEL ERLGDATIGA ATPARVAVMF DWNNWWAIDD AVGPVREKRY 

       430        440        450        460        470        480 
VETVRQHYRA IWRKNVPVDV VFSDSDLSRY DLVIAPMLYM VKPGVAERIE GFVRGGGVFV 

       490        500        510        520        530        540 
ATQFSGVADE HDLAFEGYPG PLRRVLGIWV EEIDALYEGQ VNHIVMADGT GTYECGRMCD 

       550        560        570        580        590        600 
IVRTETARVV ATYGEDFYAG TPVVTENRFG EGRAYYIASH PEDRFLDEFY GLLLLEQGVQ 

       610        620        630        640        650        660 
PVMETPAGVE AALREKDGAR LVFLLNHNPE EVTVRLPEGE AFLELLSGEE LRGEIVMAAY 


DVRILRADA 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001826 Genomic DNA. Translation: ACZ43530.1.
RefSeqYP_003324352.1. NC_013526.1.

3D structure databases

ProteinModelPortalD1CIF9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ43530; ACZ43530; Tter_2642.
GeneID8640671.
KEGGttr:Tter_2642.
PATRIC32505715. VBITheTer68767_2817.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000117811.
KOK12308.
OMADWENWWA.
OrthoDBEOG6GTZGG.

Enzyme and pathway databases

BioCycTTER525904:GHMJ-2703-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD1CIF9_THET1
AccessionPrimary (citable) accession number: D1CIF9
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: November 13, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)