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D1BZD5 (D1BZD5_XYLCX) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:murI HAMAP MF_00258
Ordered Locus Names:Xcel_1058
OrganismXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) [Complete proteome] [HAMAP]
Taxonomic identifier446471 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Promicromonosporaceae › Xylanimonas

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942

Catalytic activity

L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
D1BZD5 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 567D665F451EF61F

FASTA26828,485
        10         20         30         40         50         60 
MNDAPIGVFD SGVGGLTVAR AILDQLPHEQ VLYIGDTANA PYGPKPLAAV RAMALAVMDD 

        70         80         90        100        110        120 
LVDQGVKLLV IACNSATAVA LPDARERYEV RRGIPVVEVI RPAARRAVVT SRSGRIGVIG 

       130        140        150        160        170        180 
TKATIDSRAY EDAFHVTPGL IITTQACPEF VPLVERGITS GPEILAAAHR YLDPVRDAGV 

       190        200        210        220        230        240 
DTLVLGCTHY PLLAGAISYV MGEDVTLVSS AEETAKDVYR TLVASGLERS PQAGPPEHRF 

       250        260 
VSTGDTAAFE EVARRFLGPE VRFVEAAR

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References

[1]"The complete chromosome of Xylanimonas cellulosilytica DSM 15894."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Foster B., Clum A., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P., Woyke T., Wu D., Gehrich-Schroeter G., Schneider S., Pukall S.R., Klenk H.P., Eisen J.A.
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001821 Genomic DNA. Translation: ACZ30089.1.
RefSeqYP_003325647.1. NC_013530.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8648569.
GenomeReviewsGene locus Xcel_1058 in contig CP001821_GR.
KEGGxce:Xcel_1058.
PATRIC32551069. VBIXylCel24446_1084.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPQEDTIY.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD1BZD5_XYLCX
AccessionPrimary (citable) accession number: D1BZD5
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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