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D1BX88 (D1BX88_XYLCX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length592 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
D1BX88 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 0B5305E500D788E3

FASTA59260,486
        10         20         30         40         50         60 
MPPRSAFRGA RPHIHGGGAV SRGPVSAAGG SIDSVLFHDV AVTSAGVAAT RSRLAKRELL 

        70         80         90        100        110        120 
AAALRAAAHG GMTGGDATAD GAAAGEGMAG GAATGGATTG GPGSDDGRAG EEVDVVATFL 

       130        140        150        160        170        180 
SGRVRQRRTG VGWRSLTSLP APASAPTLTP LDVDAALQTM ADAEGPGSAA VRGEAVRRLF 

       190        200        210        220        230        240 
AAATQDEQTF LRGLIVGELR QGALDSLLLD AVAAAADVPL AAVRRAAMFS APSGPIARAA 

       250        260        270        280        290        300 
LTGGAAALAA FRLEPGRPVR PMLASPAPDV AAALAGIGGP VAVEAKIDGI RVQLHKHGND 

       310        320        330        340        350        360 
VAVYTRSLDD VTERLPELVA LLRSLPVATA VLDGEAIALG ADGRPLAFQD TAARTGSHDA 

       370        380        390        400        410        420 
DATGRVPLTA FLFDALHLAG RDLVDAPESE RFAALERVAP PSALVRRIVT ADPDEATAFF 

       430        440        450        460        470        480 
AEVLASGHEG VVVKDLAAPY DAGRRGGAWV KVKPRHTLDL VVLAVERGSG RRSGWLSNIH 

       490        500        510        520        530        540 
LGARVPGAGP DSADGWVMLG KTFKGMSDEM LAWQTARFTE LADGPADGWV VRVRPEQVVE 

       550        560        570        580        590 
IAFDGVQRST RYPGGVALRF ARVLRYRDDK PAAEADTIDA VRAIAGGNAS GG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001821 Genomic DNA. Translation: ACZ31656.1.
RefSeqYP_003327214.1. NC_013530.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ31656; ACZ31656; Xcel_2642.
GeneID8650185.
KEGGxce:Xcel_2642.
PATRIC32554339. VBIXylCel24446_2688.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036008.
KOK01971.
OMAARVQVHK.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycXCEL446471:GHA2-2691-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD1BX88_XYLCX
AccessionPrimary (citable) accession number: D1BX88
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)