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D1BW88

- D1BW88_XYLCX

UniProt

D1BW88 - D1BW88_XYLCX

Protein

Alpha-amylase

Gene

Xcel_2418

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciXCEL446471:GHA2-2467-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Xcel_2418Imported
    OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
    Taxonomic identifieri446471 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
    ProteomesiUP000002255: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD1BW88.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiRMKANIG.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR012810. TreS/a-amylase_N.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D1BW88-1 [UniParc]FASTAAdd to Basket

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    MSIAEVPRPV TQALPVQALP PKRQPEPPTL GRPGLTDDPD WYRKAVFYEV    50
    IVRAFSDSQG TGTGDLRGII DRLDYLQWLG VDCLWLPPFF PSPLRDGGYD 100
    VSDYTAIAAQ YGTTADFTEL IEEAHARGIR VVVDCVMNHT SDQHPWFQAS 150
    RSDPDGPYGD FYVWSDDNTR YQDARIIFVD TETSNWTFDP VRRQYFWHRF 200
    FHHQPDLNFE NPRVQEAMLD VARFWLGIGV DGFRLDAVPY LFEAEGTNCE 250
    NLPETHAFLR RLRRMVDTEF PGRILLAEAN QWPADVVDYF GTDDEPECHM 300
    CFHFPVMPRI YYALRDQRAR QIVDILADTP KIPAQGGQWS TFLRNHDELT 350
    LEMVSTDERA SMYGWYATDP RMRANVGIRR RLAPLLDNSR KEIELAHALL 400
    LSLPGSPCLY YGDEIGMGDN IWLPDRDAVR TPMQWTPDRN AGFSTADPGK 450
    LYLPLIQSLV HHYGNYNVEA QLAQPTSLLH WVHGMLAVRR LHPAFGTGDF 500
    VHREADDEAI LAFTRSSEEE TLFVAANMST MARSATITLP GFEGWTLVDV 550
    FGGARFPAVG ADGTVTMTWG SRDFYWLVLA PPPEARTDGV Q 591
    Length:591
    Mass (Da):67,188
    Last modified:January 19, 2010 - v1
    Checksum:i6B0ED84FA966D7E5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001821 Genomic DNA. Translation: ACZ31433.1.
    RefSeqiYP_003326991.1. NC_013530.1.

    Genome annotation databases

    EnsemblBacteriaiACZ31433; ACZ31433; Xcel_2418.
    GeneIDi8649960.
    KEGGixce:Xcel_2418.
    PATRICi32553877. VBIXylCel24446_2458.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001821 Genomic DNA. Translation: ACZ31433.1 .
    RefSeqi YP_003326991.1. NC_013530.1.

    3D structure databases

    ProteinModelPortali D1BW88.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ31433 ; ACZ31433 ; Xcel_2418 .
    GeneIDi 8649960.
    KEGGi xce:Xcel_2418.
    PATRICi 32553877. VBIXylCel24446_2458.

    Phylogenomic databases

    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi RMKANIG.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci XCEL446471:GHA2-2467-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR012810. TreS/a-amylase_N.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    TIGRFAMsi TIGR02456. treS_nterm. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

    Entry informationi

    Entry nameiD1BW88_XYLCX
    AccessioniPrimary (citable) accession number: D1BW88
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3