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D1BW88

- D1BW88_XYLCX

UniProt

D1BW88 - D1BW88_XYLCX

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Protein

Alpha-amylase

Gene

Xcel_2418

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-2467-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Xcel_2418Imported
OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
Taxonomic identifieri446471 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
ProteomesiUP000002255: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD1BW88.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.
OMAiRMKANIG.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BW88-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSIAEVPRPV TQALPVQALP PKRQPEPPTL GRPGLTDDPD WYRKAVFYEV
60 70 80 90 100
IVRAFSDSQG TGTGDLRGII DRLDYLQWLG VDCLWLPPFF PSPLRDGGYD
110 120 130 140 150
VSDYTAIAAQ YGTTADFTEL IEEAHARGIR VVVDCVMNHT SDQHPWFQAS
160 170 180 190 200
RSDPDGPYGD FYVWSDDNTR YQDARIIFVD TETSNWTFDP VRRQYFWHRF
210 220 230 240 250
FHHQPDLNFE NPRVQEAMLD VARFWLGIGV DGFRLDAVPY LFEAEGTNCE
260 270 280 290 300
NLPETHAFLR RLRRMVDTEF PGRILLAEAN QWPADVVDYF GTDDEPECHM
310 320 330 340 350
CFHFPVMPRI YYALRDQRAR QIVDILADTP KIPAQGGQWS TFLRNHDELT
360 370 380 390 400
LEMVSTDERA SMYGWYATDP RMRANVGIRR RLAPLLDNSR KEIELAHALL
410 420 430 440 450
LSLPGSPCLY YGDEIGMGDN IWLPDRDAVR TPMQWTPDRN AGFSTADPGK
460 470 480 490 500
LYLPLIQSLV HHYGNYNVEA QLAQPTSLLH WVHGMLAVRR LHPAFGTGDF
510 520 530 540 550
VHREADDEAI LAFTRSSEEE TLFVAANMST MARSATITLP GFEGWTLVDV
560 570 580 590
FGGARFPAVG ADGTVTMTWG SRDFYWLVLA PPPEARTDGV Q
Length:591
Mass (Da):67,188
Last modified:January 19, 2010 - v1
Checksum:i6B0ED84FA966D7E5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001821 Genomic DNA. Translation: ACZ31433.1.
RefSeqiYP_003326991.1. NC_013530.1.

Genome annotation databases

EnsemblBacteriaiACZ31433; ACZ31433; Xcel_2418.
GeneIDi8649960.
KEGGixce:Xcel_2418.
PATRICi32553877. VBIXylCel24446_2458.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001821 Genomic DNA. Translation: ACZ31433.1 .
RefSeqi YP_003326991.1. NC_013530.1.

3D structure databases

ProteinModelPortali D1BW88.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ31433 ; ACZ31433 ; Xcel_2418 .
GeneIDi 8649960.
KEGGi xce:Xcel_2418.
PATRICi 32553877. VBIXylCel24446_2458.

Phylogenomic databases

HOGENOMi HOG000220639.
KOi K05343.
OMAi RMKANIG.
OrthoDBi EOG6RVFV2.

Enzyme and pathway databases

BioCyci XCEL446471:GHA2-2467-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
TIGRFAMsi TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

Entry informationi

Entry nameiD1BW88_XYLCX
AccessioniPrimary (citable) accession number: D1BW88
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: October 1, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3