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D1BUF6

- D1BUF6_XYLCX

UniProt

D1BUF6 - D1BUF6_XYLCX

Protein

Beta-galactosidase

Gene

Xcel_2151

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei123 – 1231SubstrateUniRule annotation
    Binding sitei161 – 1611SubstrateUniRule annotation
    Active sitei162 – 1621Proton donorUniRule annotation
    Active sitei318 – 3181NucleophileUniRule annotation
    Binding sitei326 – 3261SubstrateUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciXCEL446471:GHA2-2192-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Ordered Locus Names:Xcel_2151Imported
    OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
    Taxonomic identifieri446471 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
    ProteomesiUP000002255: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD1BUF6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000117811.
    KOiK12308.
    OMAiADVAILW.
    OrthoDBiEOG6GTZGG.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D1BUF6-1 [UniParc]FASTAAdd to Basket

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    MNTPFSPGPD YTGWLPGLDA ICYGGDYNPE QWPEEVWEQD VALMKEAGVN    50
    LVSIGIFSWA LLEPRDGEFD FAWLDRLIEL LHSHGIRVDL GTPTASPPAW 100
    FFRQYPESRV VTKNGTVLGF GSRGMAAPSS SDYRRHAVRI ATQLAERYGT 150
    HPALALWHVH NEYGAPVGED FSAHAQRAWR TWLRDRYVTL DALNAAWGTR 200
    FWGQVYGDWQ EVGVPAATPS IANPAQRLDF ARFTDAMLRE CFVAERDAIR 250
    AHSTVPITTN FMAVACPATD LFAWGREVDI VSNDHYLWAA DPRNYVTLAL 300
    AADLTRSVAG GKPWMLLEHS TSGVNWQPRN VAKRAGEEQR NAFSHLGRGA 350
    DAIMFFQWRA SRSGAEKFHS AMIPHAGTNS RIWREVVSLG SVLGQLGELR 400
    GSRTQADVAI LWDQESLWAQ GLEWRPSEDL QAGERIQTFY DRLWRDGVTV 450
    DLAHPSSDLS AYRLVVAPAS YLLTQASAAN LTRYVEGGGT LLVSCFSGVV 500
    DEFDRVHEGG FMAPLRDALG VQVEELLPLR EGESLSVVGL SPSSDDEAAG 550
    AVTGTVWAEA LMLGGAEVVG TYASGPAAGD AAITRHTHGA GTGWYLSTVL 600
    DADALAPLMQ RVYADAGVVP SDLPEDVEVL HRVGEGTEWT VAINHTDADA 650
    AVPVGTGAMD ALSGAAVDGA VKVPAGEVRV LRRAR 685
    Length:685
    Mass (Da):74,530
    Last modified:January 19, 2010 - v1
    Checksum:iB7BC9742D0BEE111
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001821 Genomic DNA. Translation: ACZ31169.1.
    RefSeqiYP_003326727.1. NC_013530.1.

    Genome annotation databases

    EnsemblBacteriaiACZ31169; ACZ31169; Xcel_2151.
    GeneIDi8649685.
    KEGGixce:Xcel_2151.
    PATRICi32553329. VBIXylCel24446_2192.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001821 Genomic DNA. Translation: ACZ31169.1 .
    RefSeqi YP_003326727.1. NC_013530.1.

    3D structure databases

    ProteinModelPortali D1BUF6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ31169 ; ACZ31169 ; Xcel_2151 .
    GeneIDi 8649685.
    KEGGi xce:Xcel_2151.
    PATRICi 32553329. VBIXylCel24446_2192.

    Phylogenomic databases

    HOGENOMi HOG000117811.
    KOi K12308.
    OMAi ADVAILW.
    OrthoDBi EOG6GTZGG.

    Enzyme and pathway databases

    BioCyci XCEL446471:GHA2-2192-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

    Entry informationi

    Entry nameiD1BUF6_XYLCX
    AccessioniPrimary (citable) accession number: D1BUF6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3