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D1BTG9

- D1BTG9_XYLCX

UniProt

D1BTG9 - D1BTG9_XYLCX

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Protein

Thymidine kinase

Gene

tdk

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + thymidine = ADP + thymidine 5'-phosphate.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei87 – 871Proton acceptorUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi9 – 168ATPUniRule annotation
Nucleotide bindingi86 – 894ATPUniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. thymidine kinase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. DNA biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationSAAS annotation, Transferase

Keywords - Biological processi

DNA synthesisUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-1966-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Thymidine kinaseUniRule annotationSAAS annotation (EC:2.7.1.21UniRule annotationSAAS annotation)
Gene namesi
Name:tdkUniRule annotation
Ordered Locus Names:Xcel_1929Imported
OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
Taxonomic identifieri446471 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
ProteomesiUP000002255: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD1BTG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine kinase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000076391.
KOiK00857.
OMAiELKTVCH.
OrthoDBiEOG69D3J2.

Family and domain databases

HAMAPiMF_00124. Thymidine_kinase.
InterProiIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PfamiPF00265. TK. 1 hit.
[Graphical view]
PIRSFiPIRSF035805. TK_cell. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BTG9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAELVFFSGT MDSGKSTLAL QTDYNYAARG RTGLVFTRHD RAGAARISSR
60 70 80 90 100
LGLETDAREA DAATDFWELV AEEGRQGRPV DYLVCDEAQF YSPEQIEQLA
110 120 130 140 150
RLVDEVEIDV FAFGITTDFR TKLFPGSARL LELADRIEVL QVPALCWCGR
160 170 180 190 200
PATHQARTVD GVMVVEGEQV VVGDTAASAA VVAYEVLCRR HHMRRMTASS
210
ARQHATTDEA RLDLV
Length:215
Mass (Da):23,757
Last modified:January 19, 2010 - v1
Checksum:i2DCF6A74220C3DDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30948.1.
RefSeqiWP_012878690.1. NC_013530.1.
YP_003326506.1. NC_013530.1.

Genome annotation databases

EnsemblBacteriaiACZ30948; ACZ30948; Xcel_1929.
GeneIDi8649459.
KEGGixce:Xcel_1929.
PATRICi32552877. VBIXylCel24446_1969.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30948.1 .
RefSeqi WP_012878690.1. NC_013530.1.
YP_003326506.1. NC_013530.1.

3D structure databases

ProteinModelPortali D1BTG9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ30948 ; ACZ30948 ; Xcel_1929 .
GeneIDi 8649459.
KEGGi xce:Xcel_1929.
PATRICi 32552877. VBIXylCel24446_1969.

Phylogenomic databases

HOGENOMi HOG000076391.
KOi K00857.
OMAi ELKTVCH.
OrthoDBi EOG69D3J2.

Enzyme and pathway databases

BioCyci XCEL446471:GHA2-1966-MONOMER.

Family and domain databases

HAMAPi MF_00124. Thymidine_kinase.
InterProi IPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view ]
Pfami PF00265. TK. 1 hit.
[Graphical view ]
PIRSFi PIRSF035805. TK_cell. 1 hit.
SUPFAMi SSF52540. SSF52540. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

Entry informationi

Entry nameiD1BTG9_XYLCX
AccessioniPrimary (citable) accession number: D1BTG9
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: November 26, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3