ID   D1BSK6_XYLCX            Unreviewed;       371 AA.
AC   D1BSK6;
DT   19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT   19-JAN-2010, sequence version 1.
DT   27-MAR-2024, entry version 60.
DE   SubName: Full=DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ACZ30698.1};
GN   OrderedLocusNames=Xcel_1675 {ECO:0000313|EMBL:ACZ30698.1};
OS   Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 /
OS   XIL07).
OC   Bacteria; Actinomycetota; Actinomycetes; Micrococcales;
OC   Promicromonosporaceae; Xylanimonas.
OX   NCBI_TaxID=446471 {ECO:0000313|EMBL:ACZ30698.1, ECO:0000313|Proteomes:UP000002255};
RN   [1] {ECO:0000313|Proteomes:UP000002255}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15894 / CECT 5975 / LMG 20990 / XIL07
RC   {ECO:0000313|Proteomes:UP000002255};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Mikhailova N., Foster B., Clum A., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P.,
RA   Woyke T., Wu D., Gehrich-Schroeter G., Schneider S., Pukall S.R.,
RA   Klenk H.P., Eisen J.A.;
RT   "The complete chromosome of Xylanimonas cellulosilytica DSM 15894.";
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ACZ30698.1, ECO:0000313|Proteomes:UP000002255}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15894 / CECT 5975 / LMG 20990 / XIL07
RC   {ECO:0000313|Proteomes:UP000002255};
RX   PubMed=21304672; DOI=10.4056/sigs.571102;
RA   Foster B., Pukall R., Abt B., Nolan M., Glavina Del Rio T., Chen F.,
RA   Lucas S., Tice H., Pitluck S., Cheng J.-F., Chertkov O., Brettin T.,
RA   Han C., Detter J.C., Bruce D., Goodwin L., Ivanova N., Mavromatis K.,
RA   Pati A., Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L.,
RA   Chang Y.-J., Jeffries C.D., Chain P., Rohde M., Goeker M., Bristow J.,
RA   Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P.,
RA   Lapidus A.;
RT   "Complete genome sequence of Xylanimonas cellulosilytica type strain
RT   (XIL07).";
RL   Stand. Genomic Sci. 2:1-8(2010).
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DR   EMBL; CP001821; ACZ30698.1; -; Genomic_DNA.
DR   RefSeq; WP_012878440.1; NC_013530.1.
DR   AlphaFoldDB; D1BSK6; -.
DR   STRING; 446471.Xcel_1675; -.
DR   KEGG; xce:Xcel_1675; -.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_1_0_11; -.
DR   OrthoDB; 9770771at2; -.
DR   Proteomes; UP000002255; Chromosome.
DR   CDD; cd04865; LigD_Pol_like_2; 1.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02778; ligD_pol; 1.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002255}.
FT   DOMAIN          34..298
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
FT   REGION          323..371
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        346..365
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   371 AA;  40764 MW;  64178AC809A4F98F CRC64;
     MPPSAAPAVE VDAAGRPVRV SSPDRVVFPA LGITKLQVVE YFLAVGDGIL GALLHRPTTL
     ERWPKGFFDG AVMATRADSR GDAFYQKRVP QGAPEYVETA TIAFPSGRTA AEVAPTELAV
     VAWAANLGTL TFHPWPVRRD DVEAVDQLRI DLDPQPGTTF DDAARVAPVL REVLGELGLT
     GYPKTSGGRG LHVFVPIAPR WSFAQARRAT IAIGRELERR LPDQVTTRWW KEERGERIFV
     DYNQMARDRT IASAYSVRAR AQATVSAPLT WDEVGTVRPA DFDLTTMPAR FAEVGDLFAP
     LRADRDPALD CSLDAALELA RRDEEEHGLG DLPYPPEYPK MPGEPKRVQP SRDRDRPRDD
     AEDGGPGQAP R
//