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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Xcel_1675

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-1706-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Xcel_1675Imported
OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
Taxonomic identifieri446471 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
ProteomesiUP000002255 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BSK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPSAAPAVE VDAAGRPVRV SSPDRVVFPA LGITKLQVVE YFLAVGDGIL
60 70 80 90 100
GALLHRPTTL ERWPKGFFDG AVMATRADSR GDAFYQKRVP QGAPEYVETA
110 120 130 140 150
TIAFPSGRTA AEVAPTELAV VAWAANLGTL TFHPWPVRRD DVEAVDQLRI
160 170 180 190 200
DLDPQPGTTF DDAARVAPVL REVLGELGLT GYPKTSGGRG LHVFVPIAPR
210 220 230 240 250
WSFAQARRAT IAIGRELERR LPDQVTTRWW KEERGERIFV DYNQMARDRT
260 270 280 290 300
IASAYSVRAR AQATVSAPLT WDEVGTVRPA DFDLTTMPAR FAEVGDLFAP
310 320 330 340 350
LRADRDPALD CSLDAALELA RRDEEEHGLG DLPYPPEYPK MPGEPKRVQP
360 370
SRDRDRPRDD AEDGGPGQAP R
Length:371
Mass (Da):40,764
Last modified:January 18, 2010 - v1
Checksum:i64178AC809A4F98F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30698.1.
RefSeqiWP_012878440.1. NC_013530.1.
YP_003326256.1. NC_013530.1.

Genome annotation databases

EnsemblBacteriaiACZ30698; ACZ30698; Xcel_1675.
KEGGixce:Xcel_1675.
PATRICi32552349. VBIXylCel24446_1711.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30698.1.
RefSeqiWP_012878440.1. NC_013530.1.
YP_003326256.1. NC_013530.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACZ30698; ACZ30698; Xcel_1675.
KEGGixce:Xcel_1675.
PATRICi32552349. VBIXylCel24446_1711.

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-1706-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

Entry informationi

Entry nameiD1BSK6_XYLCX
AccessioniPrimary (citable) accession number: D1BSK6
Entry historyi
Integrated into UniProtKB/TrEMBL: January 18, 2010
Last sequence update: January 18, 2010
Last modified: March 31, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.