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D1BSK5

- D1BSK5_XYLCX

UniProt

D1BSK5 - D1BSK5_XYLCX

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Xcel_1674

Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-1705-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Xcel_1674Imported
OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
Taxonomic identifieri446471 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
ProteomesiUP000002255: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD1BSK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D1BSK5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPLPLTPPIL PMLARSAPSV PDQPDDPSTP GTATRAWVYE PKWDGFRAIV
60 70 80 90 100
YRDGDDVRID SRNARPMQRY FPEVVEAVLA ALPERCVVDG EIVVAQPGDG
110 120 130 140 150
AGDLRRAHLD FEVLSQRIHP AASRVRMLAE SVPASLVVFD VLALDDADLT
160 170 180 190 200
ARPLRDRLAA LDRLALTGPQ VFATPRTTDA AVAREWFERF EGAGLDGVVA
210 220 230 240 250
KPLDGAYQPD KRAMLKVKHA RTADVVLAGY RLHKTSTADR PLIGSLLLGL
260 270 280 290 300
HDDAGQLQFV GVAASFPASR RAALVEELAS LVVQPGTPDH AAHPWGAWQD
310 320 330 340 350
PAAGDGTAGE RRPGAQSRWS AGKDLSFTPL RAERVLEVGY DHMEGTRFRH
360 370 380 390
TAQFKRWRPD REPASCTFSQ LEEPVGYDLA SLLPGAPGTA
Length:390
Mass (Da):42,356
Last modified:January 19, 2010 - v1
Checksum:iDD74A91EEF54B9D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30697.1.
RefSeqiWP_012878439.1. NC_013530.1.
YP_003326255.1. NC_013530.1.

Genome annotation databases

EnsemblBacteriaiACZ30697; ACZ30697; Xcel_1674.
GeneIDi8649198.
KEGGixce:Xcel_1674.
PATRICi32552347. VBIXylCel24446_1710.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001821 Genomic DNA. Translation: ACZ30697.1 .
RefSeqi WP_012878439.1. NC_013530.1.
YP_003326255.1. NC_013530.1.

3D structure databases

ProteinModelPortali D1BSK5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ30697 ; ACZ30697 ; Xcel_1674 .
GeneIDi 8649198.
KEGGi xce:Xcel_1674.
PATRICi 32552347. VBIXylCel24446_1710.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci XCEL446471:GHA2-1705-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07Imported.

Entry informationi

Entry nameiD1BSK5_XYLCX
AccessioniPrimary (citable) accession number: D1BSK5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: October 29, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3