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D1BSK5

- D1BSK5_XYLCX

UniProt

D1BSK5 - D1BSK5_XYLCX

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Xcel_1674
Organism
Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXCEL446471:GHA2-1705-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Xcel_1674Imported
OrganismiXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Imported
Taxonomic identifieri446471 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeXylanimonas
ProteomesiUP000002255: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD1BSK5.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D1BSK5-1 [UniParc]FASTAAdd to Basket

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MPLPLTPPIL PMLARSAPSV PDQPDDPSTP GTATRAWVYE PKWDGFRAIV    50
YRDGDDVRID SRNARPMQRY FPEVVEAVLA ALPERCVVDG EIVVAQPGDG 100
AGDLRRAHLD FEVLSQRIHP AASRVRMLAE SVPASLVVFD VLALDDADLT 150
ARPLRDRLAA LDRLALTGPQ VFATPRTTDA AVAREWFERF EGAGLDGVVA 200
KPLDGAYQPD KRAMLKVKHA RTADVVLAGY RLHKTSTADR PLIGSLLLGL 250
HDDAGQLQFV GVAASFPASR RAALVEELAS LVVQPGTPDH AAHPWGAWQD 300
PAAGDGTAGE RRPGAQSRWS AGKDLSFTPL RAERVLEVGY DHMEGTRFRH 350
TAQFKRWRPD REPASCTFSQ LEEPVGYDLA SLLPGAPGTA 390
Length:390
Mass (Da):42,356
Last modified:January 19, 2010 - v1
Checksum:iDD74A91EEF54B9D9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001821 Genomic DNA. Translation: ACZ30697.1.
RefSeqiYP_003326255.1. NC_013530.1.

Genome annotation databases

EnsemblBacteriaiACZ30697; ACZ30697; Xcel_1674.
GeneIDi8649198.
KEGGixce:Xcel_1674.
PATRICi32552347. VBIXylCel24446_1710.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001821 Genomic DNA. Translation: ACZ30697.1 .
RefSeqi YP_003326255.1. NC_013530.1.

3D structure databases

ProteinModelPortali D1BSK5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ30697 ; ACZ30697 ; Xcel_1674 .
GeneIDi 8649198.
KEGGi xce:Xcel_1674.
PATRICi 32552347. VBIXylCel24446_1710.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci XCEL446471:GHA2-1705-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15894 / CECT 5975 / LMG 20990 / XIL07.

Entry informationi

Entry nameiD1BSK5_XYLCX
AccessioniPrimary (citable) accession number: D1BSK5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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