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Protein

Beta-galactosidase

Gene

Sked_03930

Organism
Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641Proton donorUniRule annotation
Active sitei321 – 3211NucleophileUniRule annotation
Binding sitei329 – 3291SubstrateUniRule annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. galactose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciSKED446469:GHD3-392-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
Short name:
Beta-galUniRule annotation
Gene namesi
Ordered Locus Names:Sked_03930Imported
OrganismiSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)Imported
Taxonomic identifieri446469 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeSanguibacteraceaeSanguibacter
ProteomesiUP000000322: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD1BK83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 42 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000117811.
KOiK12308.
OMAiADVAILW.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProiIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFiPIRSF001084. B-galactosidase. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BK83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSESTAVRTA AADAGWLPGV GTISYGGDYN PEQWPEEVWV EDVALMREAG
60 70 80 90 100
VNLVSVGIFS WARLEPQEGV FDFAWLDRLF DLLHDAGIRV DLGTPTAAPP
110 120 130 140 150
AWFYATYPDS RVVTRDGVVL GHGSRGMVSP SSPDYRRACE RITRALGERY
160 170 180 190 200
GAHPALALWH VHNEYGAPVS DSYDDHSVRA FRTWLQARYG TLDGLNTAWG
210 220 230 240 250
TAFWGQTYGE WDHIGAPATS ASVVNPAQRL DFARFTSDAL LACFTAERDI
260 270 280 290 300
LHELSPGIPV TTNFMATSCP SMDLWRWARE VDVVSNDHYL TAAEVRNHVT
310 320 330 340 350
LALDADLTRS LAGGKPWILM EHSTSGVNWQ PRNVAKRRGE MARNALSHLG
360 370 380 390 400
RGADGILFFQ WRASRSGAEK FHSSMLPHAG TSSRVWKEVV ELGGMLSNLA
410 420 430 440 450
EVKGSRVHAD VAILWDWESF WAQDLEWRPS VDHSHRERIV AFYDQLWRDN
460 470 480 490 500
VTADLVHPEA DLSGYRMVLA PASYLLTDAG AANLTAFTAA GGTLVVSCFS
510 520 530 540 550
GLVDENDAVR AGGLVAALHD VLGVRVDELL PLREGETLAL SGGRFDGLEA
560 570 580 590 600
DVWSEDLVVT TADVAATYAS GPAEGEAAIT RNVHGDGVAW YTSTRLTGAA
610 620 630 640 650
LTAFLDGAYA DARLVPERSL PEGVEVVRRR STDGRSEYTV VLNHGTEDVL
660 670 680
VPGAGRVIVG DEVDGTPRVP AGGVAVAVSE IG
Length:682
Mass (Da):74,005
Last modified:January 19, 2010 - v1
Checksum:i05AA578C8B77B023
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001819 Genomic DNA. Translation: ACZ20360.1.
RefSeqiYP_003313194.1. NC_013521.1.

Genome annotation databases

EnsemblBacteriaiACZ20360; ACZ20360; Sked_03930.
GeneIDi8632031.
KEGGiske:Sked_03930.
PATRICi32389214. VBISanKed123513_0384.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001819 Genomic DNA. Translation: ACZ20360.1.
RefSeqiYP_003313194.1. NC_013521.1.

3D structure databases

ProteinModelPortaliD1BK83.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACZ20360; ACZ20360; Sked_03930.
GeneIDi8632031.
KEGGiske:Sked_03930.
PATRICi32389214. VBISanKed123513_0384.

Phylogenomic databases

HOGENOMiHOG000117811.
KOiK12308.
OMAiADVAILW.

Enzyme and pathway databases

BioCyciSKED446469:GHD3-392-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProiIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFiPIRSF001084. B-galactosidase. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74Imported.

Entry informationi

Entry nameiD1BK83_SANKS
AccessioniPrimary (citable) accession number: D1BK83
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: February 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.