Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

D1BK83

- D1BK83_SANKS

UniProt

D1BK83 - D1BK83_SANKS

Protein

Beta-galactosidase

Gene

Sked_03930

Organism
Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei125 – 1251Substrate
    Binding sitei163 – 1631Substrate
    Active sitei164 – 1641Proton donorUniRule annotation
    Active sitei321 – 3211NucleophileUniRule annotation
    Binding sitei329 – 3291SubstrateUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Enzyme and pathway databases

    BioCyciSKED446469:GHD3-392-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Ordered Locus Names:Sked_03930Imported
    OrganismiSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)Imported
    Taxonomic identifieri446469 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeSanguibacteraceaeSanguibacter
    ProteomesiUP000000322: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD1BK83.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000117811.
    KOiK12308.
    OMAiADVAILW.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D1BK83-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSESTAVRTA AADAGWLPGV GTISYGGDYN PEQWPEEVWV EDVALMREAG    50
    VNLVSVGIFS WARLEPQEGV FDFAWLDRLF DLLHDAGIRV DLGTPTAAPP 100
    AWFYATYPDS RVVTRDGVVL GHGSRGMVSP SSPDYRRACE RITRALGERY 150
    GAHPALALWH VHNEYGAPVS DSYDDHSVRA FRTWLQARYG TLDGLNTAWG 200
    TAFWGQTYGE WDHIGAPATS ASVVNPAQRL DFARFTSDAL LACFTAERDI 250
    LHELSPGIPV TTNFMATSCP SMDLWRWARE VDVVSNDHYL TAAEVRNHVT 300
    LALDADLTRS LAGGKPWILM EHSTSGVNWQ PRNVAKRRGE MARNALSHLG 350
    RGADGILFFQ WRASRSGAEK FHSSMLPHAG TSSRVWKEVV ELGGMLSNLA 400
    EVKGSRVHAD VAILWDWESF WAQDLEWRPS VDHSHRERIV AFYDQLWRDN 450
    VTADLVHPEA DLSGYRMVLA PASYLLTDAG AANLTAFTAA GGTLVVSCFS 500
    GLVDENDAVR AGGLVAALHD VLGVRVDELL PLREGETLAL SGGRFDGLEA 550
    DVWSEDLVVT TADVAATYAS GPAEGEAAIT RNVHGDGVAW YTSTRLTGAA 600
    LTAFLDGAYA DARLVPERSL PEGVEVVRRR STDGRSEYTV VLNHGTEDVL 650
    VPGAGRVIVG DEVDGTPRVP AGGVAVAVSE IG 682
    Length:682
    Mass (Da):74,005
    Last modified:January 19, 2010 - v1
    Checksum:i05AA578C8B77B023
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001819 Genomic DNA. Translation: ACZ20360.1.
    RefSeqiYP_003313194.1. NC_013521.1.

    Genome annotation databases

    EnsemblBacteriaiACZ20360; ACZ20360; Sked_03930.
    GeneIDi8632031.
    KEGGiske:Sked_03930.
    PATRICi32389214. VBISanKed123513_0384.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001819 Genomic DNA. Translation: ACZ20360.1 .
    RefSeqi YP_003313194.1. NC_013521.1.

    3D structure databases

    ProteinModelPortali D1BK83.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ20360 ; ACZ20360 ; Sked_03930 .
    GeneIDi 8632031.
    KEGGi ske:Sked_03930.
    PATRICi 32389214. VBISanKed123513_0384.

    Phylogenomic databases

    HOGENOMi HOG000117811.
    KOi K12308.
    OMAi ADVAILW.

    Enzyme and pathway databases

    BioCyci SKED446469:GHD3-392-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74Imported.

    Entry informationi

    Entry nameiD1BK83_SANKS
    AccessioniPrimary (citable) accession number: D1BK83
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3