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D1BK83

- D1BK83_SANKS

UniProt

D1BK83 - D1BK83_SANKS

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Protein
Beta-galactosidase
Gene
Sked_03930
Organism
Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei125 – 1251Substrate By similarity
Binding sitei163 – 1631Substrate By similarity
Active sitei164 – 1641Proton donor By similarityUniRule annotation
Active sitei321 – 3211Nucleophile By similarityUniRule annotation
Binding sitei329 – 3291Substrate By similarityUniRule annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. galactose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciSKED446469:GHD3-392-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
Short name:
Beta-galUniRule annotation
Gene namesi
Ordered Locus Names:Sked_03930Imported
OrganismiSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)Imported
Taxonomic identifieri446469 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeSanguibacteraceaeSanguibacter
ProteomesiUP000000322: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD1BK83.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 42 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000117811.
KOiK12308.
OMAiADVAILW.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProiIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFiPIRSF001084. B-galactosidase. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BK83-1 [UniParc]FASTAAdd to Basket

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MSESTAVRTA AADAGWLPGV GTISYGGDYN PEQWPEEVWV EDVALMREAG    50
VNLVSVGIFS WARLEPQEGV FDFAWLDRLF DLLHDAGIRV DLGTPTAAPP 100
AWFYATYPDS RVVTRDGVVL GHGSRGMVSP SSPDYRRACE RITRALGERY 150
GAHPALALWH VHNEYGAPVS DSYDDHSVRA FRTWLQARYG TLDGLNTAWG 200
TAFWGQTYGE WDHIGAPATS ASVVNPAQRL DFARFTSDAL LACFTAERDI 250
LHELSPGIPV TTNFMATSCP SMDLWRWARE VDVVSNDHYL TAAEVRNHVT 300
LALDADLTRS LAGGKPWILM EHSTSGVNWQ PRNVAKRRGE MARNALSHLG 350
RGADGILFFQ WRASRSGAEK FHSSMLPHAG TSSRVWKEVV ELGGMLSNLA 400
EVKGSRVHAD VAILWDWESF WAQDLEWRPS VDHSHRERIV AFYDQLWRDN 450
VTADLVHPEA DLSGYRMVLA PASYLLTDAG AANLTAFTAA GGTLVVSCFS 500
GLVDENDAVR AGGLVAALHD VLGVRVDELL PLREGETLAL SGGRFDGLEA 550
DVWSEDLVVT TADVAATYAS GPAEGEAAIT RNVHGDGVAW YTSTRLTGAA 600
LTAFLDGAYA DARLVPERSL PEGVEVVRRR STDGRSEYTV VLNHGTEDVL 650
VPGAGRVIVG DEVDGTPRVP AGGVAVAVSE IG 682
Length:682
Mass (Da):74,005
Last modified:January 19, 2010 - v1
Checksum:i05AA578C8B77B023
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001819 Genomic DNA. Translation: ACZ20360.1.
RefSeqiYP_003313194.1. NC_013521.1.

Genome annotation databases

EnsemblBacteriaiACZ20360; ACZ20360; Sked_03930.
GeneIDi8632031.
KEGGiske:Sked_03930.
PATRICi32389214. VBISanKed123513_0384.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001819 Genomic DNA. Translation: ACZ20360.1 .
RefSeqi YP_003313194.1. NC_013521.1.

3D structure databases

ProteinModelPortali D1BK83.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ20360 ; ACZ20360 ; Sked_03930 .
GeneIDi 8632031.
KEGGi ske:Sked_03930.
PATRICi 32389214. VBISanKed123513_0384.

Phylogenomic databases

HOGENOMi HOG000117811.
KOi K12308.
OMAi ADVAILW.

Enzyme and pathway databases

BioCyci SKED446469:GHD3-392-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProi IPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view ]
PIRSFi PIRSF001084. B-galactosidase. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74.

Entry informationi

Entry nameiD1BK83_SANKS
AccessioniPrimary (citable) accession number: D1BK83
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: July 9, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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