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D1BK83 (D1BK83_SANKS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length682 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Ontologies

Keywords
   Molecular functionGlycosidase PIRNR PIRNR001084
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processgalactose metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1641Proton donor By similarity PIRSR PIRSR001084-1
Active site3211Nucleophile By similarity PIRSR PIRSR001084-1
Binding site1251Substrate By similarity
Binding site1631Substrate By similarity
Binding site3291Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
D1BK83 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 05AA578C8B77B023

FASTA68274,005
        10         20         30         40         50         60 
MSESTAVRTA AADAGWLPGV GTISYGGDYN PEQWPEEVWV EDVALMREAG VNLVSVGIFS 

        70         80         90        100        110        120 
WARLEPQEGV FDFAWLDRLF DLLHDAGIRV DLGTPTAAPP AWFYATYPDS RVVTRDGVVL 

       130        140        150        160        170        180 
GHGSRGMVSP SSPDYRRACE RITRALGERY GAHPALALWH VHNEYGAPVS DSYDDHSVRA 

       190        200        210        220        230        240 
FRTWLQARYG TLDGLNTAWG TAFWGQTYGE WDHIGAPATS ASVVNPAQRL DFARFTSDAL 

       250        260        270        280        290        300 
LACFTAERDI LHELSPGIPV TTNFMATSCP SMDLWRWARE VDVVSNDHYL TAAEVRNHVT 

       310        320        330        340        350        360 
LALDADLTRS LAGGKPWILM EHSTSGVNWQ PRNVAKRRGE MARNALSHLG RGADGILFFQ 

       370        380        390        400        410        420 
WRASRSGAEK FHSSMLPHAG TSSRVWKEVV ELGGMLSNLA EVKGSRVHAD VAILWDWESF 

       430        440        450        460        470        480 
WAQDLEWRPS VDHSHRERIV AFYDQLWRDN VTADLVHPEA DLSGYRMVLA PASYLLTDAG 

       490        500        510        520        530        540 
AANLTAFTAA GGTLVVSCFS GLVDENDAVR AGGLVAALHD VLGVRVDELL PLREGETLAL 

       550        560        570        580        590        600 
SGGRFDGLEA DVWSEDLVVT TADVAATYAS GPAEGEAAIT RNVHGDGVAW YTSTRLTGAA 

       610        620        630        640        650        660 
LTAFLDGAYA DARLVPERSL PEGVEVVRRR STDGRSEYTV VLNHGTEDVL VPGAGRVIVG 

       670        680 
DEVDGTPRVP AGGVAVAVSE IG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001819 Genomic DNA. Translation: ACZ20360.1.
RefSeqYP_003313194.1. NC_013521.1.

3D structure databases

ProteinModelPortalD1BK83.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ20360; ACZ20360; Sked_03930.
GeneID8632031.
KEGGske:Sked_03930.
PATRIC32389214. VBISanKed123513_0384.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000117811.
KOK12308.
OMAADVAILW.

Enzyme and pathway databases

BioCycSKED446469:GHD3-392-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD1BK83_SANKS
AccessionPrimary (citable) accession number: D1BK83
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: July 9, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)