D1BFH6 (D1BFH6_SANKS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Putative phenylalanine aminotransferase HAMAP-Rule MF_01513
EC=2.6.1.- HAMAP-Rule MF_01513

Gene names

Name:	pat HAMAP-Rule MF_01513
Ordered Locus Names:	Sked_35930 EMBL ACZ23479.1

Organism

Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) [Complete proteome] [HAMAP] EMBL ACZ23479.1

Taxonomic identifier

446469 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Sanguibacteraceae › Sanguibacter › Sanguibacter keddieii

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May catalyze the transamination reaction in phenylalanine biosynthesis By similarity. HAMAP-Rule MF_01513
Cofactor	Pyridoxal phosphate By similarity. HAMAP-Rule MF_01513 SAAS SAAS005861
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. HAMAP-Rule MF_01513

Ontologies

Keywords
Ligand	Pyridoxal phosphate HAMAP-Rule MF_01513 SAAS SAAS005861
Molecular function	Aminotransferase SAAS SAAS005861 HAMAP-Rule MF_01513 EMBL ACZ23479.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	histidine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	aromatic-amino-acid:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: InterPro histidinol-phosphate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	234	1	N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01513

Sequences

	Sequence		Length	Mass (Da)
	D1BFH6 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: AB13A2E5C54368C4	FASTA	367	38,644
	10 20 30 40 50 60 MTRRVPLRPA VSALPAYVPG ARVPVGAAAY KLSSNENPYP PLASVQAAII DAASDINRYP 70 80 90 100 110 120 DMFATELTEA LAHHLTADLS PQVREDGGTV SAEQVVVGNG SVAVLAHILE AVVDAGDEVV 130 140 150 160 170 180 YPWRSFEAYP IVVSVAGGTG VPVPLAPHGR LDLQAMAAAV TDRTRVVLVC TPNNPTGAAL 190 200 210 220 230 240 TQTELLGFLQ AVPSDVLVVV DEAYLEFVRS DDPVDGTAAL AAHPNVVVLR TFSKAYGLAG 250 260 270 280 290 300 LRVGYAVARP RLATGIRSAS TPFGVSHVAQ RAALASLQAK DELLARVDTI VAERTRLADG 310 320 330 340 350 360 LRDQGWELPE SQANFVWMEL GQRTAERAAD AAAAGVIVRP FAGEGLRVSV GEHEATDIFL RVAAGWR

References

[1]

"Complete genome sequence of Sanguibacter keddieii type strain (ST-74)." Ivanova N., Sikorski J., Sims D., Brettin T., Detter J.C., Han C., Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A. , Mavrommatis K., Chen A., Palaniappan K., D'haeseleer P., Chain P., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Goker M., Pukall R., Klenk H.P., Kyrpides N.C. Stand. Genomic Sci. 1:110-118(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001819 Genomic DNA. Translation: ACZ23479.1.
RefSeq	YP_003316313.1. NC_013521.1.
3D structure databases
ProteinModelPortal	D1BFH6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACZ23479; ACZ23479; Sked_35930.
GeneID	8635226.
KEGG	ske:Sked_35930.
PATRIC	32395669. VBISanKed123513_3557.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000288510.
KO	K00817.
OMA	ETEANDI.
Enzyme and pathway databases
BioCyc	SKED446469:GHD3-3587-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
HAMAP	MF_01023. HisC_aminotrans_2. MF_01513. Phe_aminotrans_2.
InterPro	IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR024892. AroT. IPR005861. HisP_aminotrans. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01141. hisC. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D1BFH6_SANKS

Accession

Primary (citable) accession number: D1BFH6

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)