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D1BEG9 (D1BEG9_SANKS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sked_13060 EMBL ACZ21247.1
OrganismSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) [Complete proteome] [HAMAP] EMBL ACZ21247.1
Taxonomic identifier446469 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeSanguibacteraceaeSanguibacter

Protein attributes

Sequence length852 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D1BEG9 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: C691A67CA2ED5363

FASTA85291,671
        10         20         30         40         50         60 
MPDDDTGAPS RAAQRETVTV DGHRVTLTNL SKVIYPETGT TKADVLAYLA AVAQPFVAHV 

        70         80         90        100        110        120 
TGRPATRKRW VHGTGGPVFF QKNLEDSAPT WVHRRDIQHS DHVNTYPLVD DLATLTWLGQ 

       130        140        150        160        170        180 
VAALEIHVPQ WRFGRTGVEH RPDRLVLDLD PGPGTGLDEC VQVALWAREI LTGMDLEPFP 

       190        200        210        220        230        240 
VTSGSKGIHL YAALDGAHDS DAVSAVAHEL ARALQADHPD LVVSDMKKSL REGKVLVDWS 

       250        260        270        280        290        300 
QNNRNKTTIS PYSLRGRDRP YVAAPRSWAE LEAGGLTHLE ADEVVARLER DGDLLAPLLT 

       310        320        330        340        350        360 
GGHAALEPTT ARMAGFERTD RLEVYRSKRD ASKTPEPVPE ASPTEASPGD GPAGSADPAA 

       370        380        390        400        410        420 
PTFVIQEHHA RALHYDFRLE HDGVLVSWAL PKGEPVDTTH NRLGVQTEDH PLEYGSFEGT 

       430        440        450        460        470        480 
IPRGEYGAGT VSIWDRGTYD LHKWREGEEV IVTLHSDGSG GTDRGSRRIA LIHTAHTGGG 

       490        500        510        520        530        540 
TSWLVHRMKD DGHSGGGAAG ASGEEDDKAE VAGSAPGEGS ASSSGSRDRP LTPMLATPGT 

       550        560        570        580        590        600 
VDDLDEDDWA FEMKWDGIRA VATVVADRDG SPGSVRLTSR NGNDLTASYP ELAALSGCVA 

       610        620        630        640        650        660 
EDVVLDGEIV ALDQGGRPSF GRLQSRMNLT ARRDVAAAQK AQGVVYMAFD LVERSGRRTT 

       670        680        690        700        710        720 
RVGYDGRRAA LEELVTESGP VHVPPAFTSD AASALAASKE LGLEGIVAKR RSSTYRPGRP 

       730        740        750        760        770        780 
AHTWVKVKHV QTQEVVVVGW RTGNGARAQT LGSLLVAVPD ATGTLRYAGR VGTGFTDATL 

       790        800        810        820        830        840 
ERLATELARN PRQTPPVDDV PAADAGDAHW VRADRVGEVA HAGWTDQGRL RHPVWRGWRS 

       850 
DKAPGDVVRE DA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001819 Genomic DNA. Translation: ACZ21247.1.
RefSeqYP_003314081.1. NC_013521.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ21247; ACZ21247; Sked_13060.
GeneID8632942.
KEGGske:Sked_13060.
PATRIC32391048. VBISanKed123513_1284.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.

Enzyme and pathway databases

BioCycSKED446469:GHD3-1303-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD1BEG9_SANKS
AccessionPrimary (citable) accession number: D1BEG9
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)