D1BDK4 (D1BDK4_SANKS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA helicase RecG EMBL ACZ21066.1

Gene names

Ordered Locus Names:

Sked_11220 EMBL ACZ21066.1

Organism

Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) [Complete proteome] [HAMAP] EMBL ACZ21066.1

Taxonomic identifier

446469 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Sanguibacteraceae › Sanguibacter › Sanguibacter keddieii

Protein attributes

Sequence length	758 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 EMBL ACZ21066.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D1BDK4 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: F9E7E932369F71D2	FASTA	758	80,884
	10 20 30 40 50 60 MSIDHPFTLD EPLTKVFEKR TSNQLAKLGL TTTGDLLRHY PRRYADPGAM SQLSTLVVGE 70 80 90 100 110 120 HVTVMAQVVS ATVREMRSRG GAMLQAVVSD GTDRLSLTFF AKHPGALRTH ESRLKPGRAG 130 140 150 160 170 180 LFTGVVSEYR NERQLTHPDY LLPGVDVENE VDALLEVSRL MPIYPATASF ASWKIHKCVR 190 200 210 220 230 240 QVLDPLHVDD LADPVPADVL GRRNLVPLVQ AFRDIHLPES ESEWHRGQKR LRYEEAFVLQ 250 260 270 280 290 300 TALALRRSEA AALEATSRTL VEDGPSILRD FDAALPFTLT TGQREVGDEI AAELAAPHPM 310 320 330 340 350 360 QRLLQGEVGS GKTVVALRAM LQVVDAGGQA ALLAPTEVLA AQHARTLAAL LGDLAAGGML 370 380 390 400 410 420 GGAAHGTRVA LVTGSQPAAV KKKNLLDAAS GAAGIVVGTH ALLSAGVQFA ELGLVVVDEQ 430 440 450 460 470 480 HRFGVEQRDL LRAKARTVPH LLVMTATPIP RTVAMTVFGD LETSTLREIP AGRSGITTYV 490 500 510 520 530 540 VPAQKPAWVS RTWAKVREEI DAGRQAYVVC PRITGDDSSE DDATPALDPA ALAGTDEDRD 550 560 570 580 590 600 NPGGPAASAA RSRTPLRAVL EVAAELAALE VFRGVRIGIL HGQMPQAEKE AAMAAFTAGE 610 620 630 640 650 660 VDLLVSTTVI EVGVDVPRAT AMVVLDADRF GLSQLHQLRG RVGRGADAGI CFLVSEMADA 670 680 690 700 710 720 EPAKTRLTTL ASTTDGFELA AADLEMRSEG DVLGAAQSGR STSLQLLRVV RDTAVIEQAR 730 740 750 EDAAAVVAVD PTLVTHPVLL AEITGRVTGE RAEYLDRS

References

[1]

"Complete genome sequence of Sanguibacter keddieii type strain (ST-74)." Ivanova N., Sikorski J., Sims D., Brettin T., Detter J.C., Han C., Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A. , Mavrommatis K., Chen A., Palaniappan K., D'haeseleer P., Chain P., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Goker M., Pukall R., Klenk H.P., Kyrpides N.C. Stand. Genomic Sci. 1:110-118(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001819 Genomic DNA. Translation: ACZ21066.1.
RefSeq	YP_003313900.1. NC_013521.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACZ21066; ACZ21066; Sked_11220.
GeneID	8632758.
KEGG	ske:Sked_11220.
PATRIC	32390678. VBISanKed123513_1100.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000036618.
KO	K03655.
OMA	SSEHIHE.
Enzyme and pathway databases
BioCyc	SKED446469:GHD3-1119-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR012340. NA-bd_OB-fold. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D1BDK4_SANKS

Accession

Primary (citable) accession number: D1BDK4

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)