Sked_10400

Functionⁱ

GO - Molecular functionⁱ

glycogen debranching enzyme activity Source: InterPro
hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

glycogen catabolic process Source: InterPro

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	GlycosidaseSAAS annotation, Hydrolase

Molecular function

GlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCycⁱ	SKED446469:G1GGO-1014-MONOMER.

BioCycⁱ

SKED446469:G1GGO-1014-MONOMER.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.

CAZyⁱ

CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Glycogen debranching enzyme GlgXImported
Gene namesⁱ	Ordered Locus Names:Sked_10400Imported
Organismⁱ	Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)Imported
Taxonomic identifierⁱ	446469 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Terrabacteria group › Actinobacteria › Actinobacteria › Micrococcales › Sanguibacteraceae › Sanguibacter › Sanguibacter keddieii
Proteomesⁱ	UP000000322 Componentⁱ: Chromosome

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	446469.Sked_10400.

STRINGⁱ

446469.Sked_10400.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	D1BCZ1.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	244 – 665	AamyInterPro annotationAdd BLAST		422

Sequence similaritiesⁱ

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Phylogenomic databases

eggNOGⁱ	ENOG4107QWS. Bacteria. COG1523. LUCA.
HOGENOMⁱ	HOG000239197.
KEGG Orthology (KO) More...KOⁱ	K01214.
OMAⁱ	DPWTGAR.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H0DZH.

Family and domain databases

Gene3Dⁱ	2.60.40.10. 1 hit. 2.60.40.1180. 1 hit.
InterProⁱ	View protein in InterPro IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013780. Glyco_hydro_b. IPR011837. Glycogen_debranch_GlgX. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF02922. CBM_48. 1 hit.
SMARTⁱ	View protein in SMART SM00642. Aamy. 1 hit.
SUPFAMⁱ	SSF51445. SSF51445. 2 hits. SSF81296. SSF81296. 1 hit.
TIGRFAMsⁱ	TIGR02100. glgX_debranch. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

D1BCZ1-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MSDTRAASVH GPVPPFGVHL DGGGVRVSVL ASHATAVDLC LIDVVHTAPG 
        60         70         80         90        100
VEPRFTERRV RLTEQAYGVW HGYVPGVHEG QRYGFRTHGP WDPAAGLRHN 
       110        120        130        140        150
PAKLLVDPYA RGLLGDLDLG PETYGHVTRL EDVVPSASAS DVSGAADASG 
       160        170        180        190        200
AAGGPAPAGA TGDAATARAA GTAGSASTAP GTDLVALPGV PRTRTPMLGR 
       210        220        230        240        250
HVVGDPYGPA DDRDSLGSVP HSVVVGPRHH HPPVRRPQVP WRDTVIYEAH 
       260        270        280        290        300
VRGLTKNLEA LPEELRGTYA GLAHPATVAH LKDLGITTVE LLPIHASVPE 
       310        320        330        340        350
PHLATKGLTN YWGYNTIGFF APHAAYATAA AQAAGPGAVL DEVKGMVHLL 
       360        370        380        390        400
HEAGLEVLLD VVYNHTCEGG APGQHLSWRG LDNSVYYVHD GGSPARLVDH 
       410        420        430        440        450
TGCGNSLDFR RPRVVQMALD SLRYWAQEVG VDGFRFDLAV TLGRDGAGFT 
       460        470        480        490        500
STHPFLVGLQ TDPVINQLKL VAEPWDVGMG GWQTGGFPAP MAEWNDRFRN 
       510        520        530        540        550
ATRSFWLSDP AAAAHGRGGH GIRELATRLA GSADLFGHSD PPLVRGAIAS 
       560        570        580        590        600
VNYVTAHDGF TMADLVAYDH KHNQANGEDG RDGSDDNRSW NHGLEGPVPS 
       610        620        630        640        650
DSLGMEIAPL RRRSIRNLMG MLLLSAGTPM ITAGDEIGRT QRGNNNAYCQ 
       660        670        680        690        700
DGEISWTRWD LDPWREDLLE TTRHLLRLRR EHLALRVDGF FLGHPQPDDE 
       710        720        730        740        750
PGQPDLAWYD AAASPVSHEQ WHDTSTRIVQ MLRRERRGHD AEEVDDSHVL 
       760        770        780        790        800
LVLNGTLDDV HVTLAGRGNS TRAWTLAWDS AWERPDEREL TVAGAPHDVA 
       810        820 
AGTEVHLEPL SMQVYLAYED RA

Length:822

Mass (Da):88,560

Last modified:January 19, 2010 - v1

Checksum:ⁱ12D8D5DFC4ACFF10

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP001819 Genomic DNA. Translation: ACZ20989.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_012866058.1. NC_013521.1.

Genome annotation databases

EnsemblBacteriaⁱ	ACZ20989; ACZ20989; Sked_10400.
KEGGⁱ	ske:Sked_10400.

Similar proteinsⁱ

50% Identity

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
D1BCZ1	D0WRW1 A0A179B1R6 D1BVV9 UPI00078171D8 A0A0A0B693 D5ULG3 A0A021VRM5 A0A1Q5Q191 A0A2A9E1C4 A0A1T5I741 +27	Actinomyces sp. oral taxon 848 str. F0332 Actinomycetaceae bacterium BA112 Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) Lysinimicrobium soli Cellulomonas cellasea DSM 20118 Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) Actinotalea ferrariae CF5-4 Actinomyces nasicola Sanguibacter antarcticus Krasilnikoviella flava And more	724	UniRef50_D0WRW1	Cluster: Glycogen debranching enzyme GlgX	38

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP001819 Genomic DNA. Translation: ACZ20989.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_012866058.1. NC_013521.1.

3D structure databases

ProteinModelPortalⁱ	D1BCZ1.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	446469.Sked_10400.

STRINGⁱ

446469.Sked_10400.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.

CAZyⁱ

CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ACZ20989; ACZ20989; Sked_10400.
KEGGⁱ	ske:Sked_10400.

Phylogenomic databases

eggNOGⁱ	ENOG4107QWS. Bacteria. COG1523. LUCA.
HOGENOMⁱ	HOG000239197.
KEGG Orthology (KO) More...KOⁱ	K01214.
OMAⁱ	DPWTGAR.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H0DZH.

Enzyme and pathway databases

BioCycⁱ	SKED446469:G1GGO-1014-MONOMER.

BioCycⁱ

SKED446469:G1GGO-1014-MONOMER.

Family and domain databases

Gene3Dⁱ	2.60.40.10. 1 hit. 2.60.40.1180. 1 hit.
InterProⁱ	View protein in InterPro IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013780. Glyco_hydro_b. IPR011837. Glycogen_debranch_GlgX. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF02922. CBM_48. 1 hit.
SMARTⁱ	View protein in SMART SM00642. Aamy. 1 hit.
SUPFAMⁱ	SSF51445. SSF51445. 2 hits. SSF81296. SSF81296. 1 hit.
TIGRFAMsⁱ	TIGR02100. glgX_debranch. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	D1BCZ1_SANKS
Accessionⁱ	D1BCZ1Primary (citable) accession number: D1BCZ1
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	January 19, 2010
	Last sequence update:	January 19, 2010
	Last modified:	February 28, 2018
	This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - D1BCZ1 (D1BCZ1_SANKS)

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Glycogen debranching enzyme GlgX

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Enzyme and pathway databases

Protein family/group databases

Names & Taxonomyⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Sequence similaritiesⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protein family/group databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - D1BCZ1 (D1BCZ1_SANKS)

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Glycogen debranching enzyme GlgX

Sked_10400

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

Protein family/group databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protein family/group databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ