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Protein
Submitted name:

Glycogen debranching enzyme GlgX

Gene

Sked_10400

Organism
Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciSKED446469:G1GGO-1014-MONOMER.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycogen debranching enzyme GlgXImported
Gene namesi
Ordered Locus Names:Sked_10400Imported
OrganismiSanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74)Imported
Taxonomic identifieri446469 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesSanguibacteraceaeSanguibacter
Proteomesi
  • UP000000322 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi446469.Sked_10400.

Structurei

3D structure databases

ProteinModelPortaliD1BCZ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini244 – 665AamyInterPro annotationAdd BLAST422

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4107QWS. Bacteria.
COG1523. LUCA.
HOGENOMiHOG000239197.
KOiK01214.
OMAiDPWTGAR.
OrthoDBiPOG091H0DZH.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
InterProiView protein in InterPro
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR011837. Glycogen_debranch_GlgX.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
PfamiView protein in Pfam
PF02922. CBM_48. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR02100. glgX_debranch. 1 hit.

Sequencei

Sequence statusi: Complete.

D1BCZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTRAASVH GPVPPFGVHL DGGGVRVSVL ASHATAVDLC LIDVVHTAPG
60 70 80 90 100
VEPRFTERRV RLTEQAYGVW HGYVPGVHEG QRYGFRTHGP WDPAAGLRHN
110 120 130 140 150
PAKLLVDPYA RGLLGDLDLG PETYGHVTRL EDVVPSASAS DVSGAADASG
160 170 180 190 200
AAGGPAPAGA TGDAATARAA GTAGSASTAP GTDLVALPGV PRTRTPMLGR
210 220 230 240 250
HVVGDPYGPA DDRDSLGSVP HSVVVGPRHH HPPVRRPQVP WRDTVIYEAH
260 270 280 290 300
VRGLTKNLEA LPEELRGTYA GLAHPATVAH LKDLGITTVE LLPIHASVPE
310 320 330 340 350
PHLATKGLTN YWGYNTIGFF APHAAYATAA AQAAGPGAVL DEVKGMVHLL
360 370 380 390 400
HEAGLEVLLD VVYNHTCEGG APGQHLSWRG LDNSVYYVHD GGSPARLVDH
410 420 430 440 450
TGCGNSLDFR RPRVVQMALD SLRYWAQEVG VDGFRFDLAV TLGRDGAGFT
460 470 480 490 500
STHPFLVGLQ TDPVINQLKL VAEPWDVGMG GWQTGGFPAP MAEWNDRFRN
510 520 530 540 550
ATRSFWLSDP AAAAHGRGGH GIRELATRLA GSADLFGHSD PPLVRGAIAS
560 570 580 590 600
VNYVTAHDGF TMADLVAYDH KHNQANGEDG RDGSDDNRSW NHGLEGPVPS
610 620 630 640 650
DSLGMEIAPL RRRSIRNLMG MLLLSAGTPM ITAGDEIGRT QRGNNNAYCQ
660 670 680 690 700
DGEISWTRWD LDPWREDLLE TTRHLLRLRR EHLALRVDGF FLGHPQPDDE
710 720 730 740 750
PGQPDLAWYD AAASPVSHEQ WHDTSTRIVQ MLRRERRGHD AEEVDDSHVL
760 770 780 790 800
LVLNGTLDDV HVTLAGRGNS TRAWTLAWDS AWERPDEREL TVAGAPHDVA
810 820
AGTEVHLEPL SMQVYLAYED RA
Length:822
Mass (Da):88,560
Last modified:January 19, 2010 - v1
Checksum:i12D8D5DFC4ACFF10
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001819 Genomic DNA. Translation: ACZ20989.1.
RefSeqiWP_012866058.1. NC_013521.1.

Genome annotation databases

EnsemblBacteriaiACZ20989; ACZ20989; Sked_10400.
KEGGiske:Sked_10400.

Similar proteinsi

Entry informationi

Entry nameiD1BCZ1_SANKS
AccessioniPrimary (citable) accession number: D1BCZ1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: February 28, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported