D1B3Z1 (D1B3Z1_SULD5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL ACZ12811.1
EC=6.5.1.1 EMBL ACZ12811.1

Gene names

Ordered Locus Names:

Sdel_1796 EMBL ACZ12811.1

Organism

Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) [Complete proteome] [HAMAP] EMBL ACZ12811.1

Taxonomic identifier

525898 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Sulfurospirillum › Sulfurospirillum deleyianum

Protein attributes

Sequence length	271 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACZ12811.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D1B3Z1 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: 70E5F147F8CA0479	FASTA	271	31,251
	10 20 30 40 50 60 MRFVWLCFVL TSLVWGAKPE LLLLETYKDQ TISGWLMSEK MDGVRAYWDG EKLISRGGTF 70 80 90 100 110 120 FAAPLWFTKD FPPFAVDGEL WSRRDDFEHI QSIVMQKEAH EGWRELAFYA FDVPKERGGL 130 140 150 160 170 180 TKRLAKLDYY LSSHSVDYLK IAPQFTCKDE NELQRFLHEV EKAGGEGVVI RHPNMPYVAT 190 200 210 220 230 240 RDAYSLKVKT FHDAECRVLS HHKGEGKYKD VLGSLTCKND VGVVFKIGSG FSDTQRHNPP 250 260 270 AIGARITYKY KELTKNGKPR FPVFVRIRED L

References

[1]

"The complete genome of Sulfurospirillum deleyianum DSM 6946." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Munk A.C., Lu M., Brettin T., Detter J.C., Han C. , Tapia R., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P., Woyke T., Wu D., Aumann P., Schneider S., Lang E., Spring S., Klenk H.P., Eisen J.A. Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51133 / DSM 6946 / 5175.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001816 Genomic DNA. Translation: ACZ12811.1.
RefSeq	YP_003304846.1. NC_013512.1.
3D structure databases
ProteinModelPortal	D1B3Z1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACZ12811; ACZ12811; Sdel_1796.
GeneID	8593348.
KEGG	sdl:Sdel_1796.
PATRIC	32484411. VBISulDel109514_1818.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
Enzyme and pathway databases
BioCyc	SDEL525898:GHVA-1839-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D1B3Z1_SULD5

Accession

Primary (citable) accession number: D1B3Z1

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)