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Protein
Submitted name:

DNA ligase (ATP)

Gene

Sdel_1796

Organism
Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSDEL525898:GHVA-1839-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Sdel_1796Imported
OrganismiSulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)Imported
Taxonomic identifieri525898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeSulfurospirillum
ProteomesiUP000002222: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD1B3Z1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000293070.
KOiK01971.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

D1B3Z1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRFVWLCFVL TSLVWGAKPE LLLLETYKDQ TISGWLMSEK MDGVRAYWDG
60 70 80 90 100
EKLISRGGTF FAAPLWFTKD FPPFAVDGEL WSRRDDFEHI QSIVMQKEAH
110 120 130 140 150
EGWRELAFYA FDVPKERGGL TKRLAKLDYY LSSHSVDYLK IAPQFTCKDE
160 170 180 190 200
NELQRFLHEV EKAGGEGVVI RHPNMPYVAT RDAYSLKVKT FHDAECRVLS
210 220 230 240 250
HHKGEGKYKD VLGSLTCKND VGVVFKIGSG FSDTQRHNPP AIGARITYKY
260 270
KELTKNGKPR FPVFVRIRED L
Length:271
Mass (Da):31,251
Last modified:January 19, 2010 - v1
Checksum:i70E5F147F8CA0479
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001816 Genomic DNA. Translation: ACZ12811.1.
RefSeqiWP_012857561.1. NC_013512.1.
YP_003304846.1. NC_013512.1.

Genome annotation databases

EnsemblBacteriaiACZ12811; ACZ12811; Sdel_1796.
GeneIDi8593348.
KEGGisdl:Sdel_1796.
PATRICi32484411. VBISulDel109514_1818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001816 Genomic DNA. Translation: ACZ12811.1.
RefSeqiWP_012857561.1. NC_013512.1.
YP_003304846.1. NC_013512.1.

3D structure databases

ProteinModelPortaliD1B3Z1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACZ12811; ACZ12811; Sdel_1796.
GeneIDi8593348.
KEGGisdl:Sdel_1796.
PATRICi32484411. VBISulDel109514_1818.

Phylogenomic databases

HOGENOMiHOG000293070.
KOiK01971.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciSDEL525898:GHVA-1839-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51133 / DSM 6946 / 5175Imported.

Entry informationi

Entry nameiD1B3Z1_SULD5
AccessioniPrimary (citable) accession number: D1B3Z1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: February 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.