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D1B3Z1

- D1B3Z1_SULD5

UniProt

D1B3Z1 - D1B3Z1_SULD5

Protein
Submitted name:

DNA ligase (ATP)

Gene

Sdel_1796

Organism
Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSDEL525898:GHVA-1839-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Sdel_1796Imported
    OrganismiSulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)Imported
    Taxonomic identifieri525898 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeSulfurospirillum
    ProteomesiUP000002222: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD1B3Z1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D1B3Z1-1 [UniParc]FASTAAdd to Basket

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    MRFVWLCFVL TSLVWGAKPE LLLLETYKDQ TISGWLMSEK MDGVRAYWDG    50
    EKLISRGGTF FAAPLWFTKD FPPFAVDGEL WSRRDDFEHI QSIVMQKEAH 100
    EGWRELAFYA FDVPKERGGL TKRLAKLDYY LSSHSVDYLK IAPQFTCKDE 150
    NELQRFLHEV EKAGGEGVVI RHPNMPYVAT RDAYSLKVKT FHDAECRVLS 200
    HHKGEGKYKD VLGSLTCKND VGVVFKIGSG FSDTQRHNPP AIGARITYKY 250
    KELTKNGKPR FPVFVRIRED L 271
    Length:271
    Mass (Da):31,251
    Last modified:January 19, 2010 - v1
    Checksum:i70E5F147F8CA0479
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001816 Genomic DNA. Translation: ACZ12811.1.
    RefSeqiWP_012857561.1. NC_013512.1.
    YP_003304846.1. NC_013512.1.

    Genome annotation databases

    EnsemblBacteriaiACZ12811; ACZ12811; Sdel_1796.
    GeneIDi8593348.
    KEGGisdl:Sdel_1796.
    PATRICi32484411. VBISulDel109514_1818.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001816 Genomic DNA. Translation: ACZ12811.1 .
    RefSeqi WP_012857561.1. NC_013512.1.
    YP_003304846.1. NC_013512.1.

    3D structure databases

    ProteinModelPortali D1B3Z1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ12811 ; ACZ12811 ; Sdel_1796 .
    GeneIDi 8593348.
    KEGGi sdl:Sdel_1796.
    PATRICi 32484411. VBISulDel109514_1818.

    Phylogenomic databases

    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SDEL525898:GHVA-1839-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51133 / DSM 6946 / 5175Imported.

    Entry informationi

    Entry nameiD1B3Z1_SULD5
    AccessioniPrimary (citable) accession number: D1B3Z1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3