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D1B3Z1

- D1B3Z1_SULD5

UniProt

D1B3Z1 - D1B3Z1_SULD5

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Protein
Submitted name:

DNA ligase (ATP)

Gene
Sdel_1796
Organism
Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSDEL525898:GHVA-1839-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Sdel_1796Imported
OrganismiSulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)Imported
Taxonomic identifieri525898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeSulfurospirillum
ProteomesiUP000002222: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD1B3Z1.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

D1B3Z1-1 [UniParc]FASTAAdd to Basket

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MRFVWLCFVL TSLVWGAKPE LLLLETYKDQ TISGWLMSEK MDGVRAYWDG    50
EKLISRGGTF FAAPLWFTKD FPPFAVDGEL WSRRDDFEHI QSIVMQKEAH 100
EGWRELAFYA FDVPKERGGL TKRLAKLDYY LSSHSVDYLK IAPQFTCKDE 150
NELQRFLHEV EKAGGEGVVI RHPNMPYVAT RDAYSLKVKT FHDAECRVLS 200
HHKGEGKYKD VLGSLTCKND VGVVFKIGSG FSDTQRHNPP AIGARITYKY 250
KELTKNGKPR FPVFVRIRED L 271
Length:271
Mass (Da):31,251
Last modified:January 19, 2010 - v1
Checksum:i70E5F147F8CA0479
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001816 Genomic DNA. Translation: ACZ12811.1.
RefSeqiWP_012857561.1. NC_013512.1.
YP_003304846.1. NC_013512.1.

Genome annotation databases

EnsemblBacteriaiACZ12811; ACZ12811; Sdel_1796.
GeneIDi8593348.
KEGGisdl:Sdel_1796.
PATRICi32484411. VBISulDel109514_1818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001816 Genomic DNA. Translation: ACZ12811.1 .
RefSeqi WP_012857561.1. NC_013512.1.
YP_003304846.1. NC_013512.1.

3D structure databases

ProteinModelPortali D1B3Z1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ12811 ; ACZ12811 ; Sdel_1796 .
GeneIDi 8593348.
KEGGi sdl:Sdel_1796.
PATRICi 32484411. VBISulDel109514_1818.

Phylogenomic databases

HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci SDEL525898:GHVA-1839-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51133 / DSM 6946 / 5175.

Entry informationi

Entry nameiD1B3Z1_SULD5
AccessioniPrimary (citable) accession number: D1B3Z1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: September 3, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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