D1B2P1 (D1B2P1_SULD5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endonuclease III EMBL ACZ12361.1
EC=4.2.99.18 EMBL ACZ12361.1

Gene names

Ordered Locus Names:

Sdel_1341 EMBL ACZ12361.1

Organism

Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) [Complete proteome] [HAMAP] EMBL ACZ12361.1

Taxonomic identifier

525898 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Sulfurospirillum › Sulfurospirillum deleyianum

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Endonuclease EMBL ACZ12361.1 Hydrolase Lyase EMBL ACZ12361.1 Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D1B2P1 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: 64C14557B368CEA6	FASTA	213	24,159
	10 20 30 40 50 60 MKKATQKESE MIKALFLEHF PQAVTELNYR NLYELLVSVM LSAQCTDKRV NLITPALFER 70 80 90 100 110 120 FPTPFHLAHA NLDELKSLIH SCSFFNNKAI NLIKMAQKVM ETYDGEIPLD EKQLIGLAGV 130 140 150 160 170 180 GQKTAHVVMI EYANANLMAV DTHVFRVAHR LGLSSAKTAL KTEEDLTQRF KKDLATLHQA 190 200 210 MVLFGRYTCK AINPLCENCF LKAYCKTTQS FKV

References

[1]

"The complete genome of Sulfurospirillum deleyianum DSM 6946." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Munk A.C., Lu M., Brettin T., Detter J.C., Han C. , Tapia R., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P., Woyke T., Wu D., Aumann P., Schneider S., Lang E., Spring S., Klenk H.P., Eisen J.A. Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51133 / DSM 6946 / 5175.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001816 Genomic DNA. Translation: ACZ12361.1.
RefSeq	YP_003304396.1. NC_013512.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACZ12361; ACZ12361; Sdel_1341.
GeneID	8592881.
KEGG	sdl:Sdel_1341.
PATRIC	32483479. VBISulDel109514_1362.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000252208.
KO	K10773.
OMA	NNKSKHL.
Enzyme and pathway databases
BioCyc	SDEL525898:GHVA-1372-MONOMER.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR005759. Endonuclease-III_Nth. IPR004035. Endouclease-III_FeS-bd_BS. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF00730. HhH-GPD. 1 hit. [Graphical view]
PIRSF	PIRSF001435. Nth. 1 hit.
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
TIGRFAMs	TIGR01083. nth. 1 hit.
PROSITE	PS00764. ENDONUCLEASE_III_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D1B2P1_SULD5

Accession

Primary (citable) accession number: D1B2P1

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 29, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)