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D1AQM8 (D1AQM8_SEBTE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sterm_3449 EMBL ACZ10288.1
OrganismSebaldella termitidis (strain ATCC 33386 / NCTC 11300) [Complete proteome] [HAMAP] EMBL ACZ10288.1
Taxonomic identifier526218 [NCBI]
Taxonomic lineageBacteriaFusobacteriaFusobacterialesLeptotrichiaceaeSebaldella

Protein attributes

Sequence length314 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACZ10288.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ACZ10288.1
Chain32 – 314283 Potential
PRO_5000536102

Sequences

Sequence LengthMass (Da)Tools
D1AQM8 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: BCBEFF1A15400617

FASTA31432,860
        10         20         30         40         50         60 
MKLKAMHKIN FKDYGVIIGF LILCTIISFA TPNFLTKTNI LNLLRQSSII GIIATGMTFV 

        70         80         90        100        110        120 
VISGNFDLSV GAIAALSGAI TMTFLSGGQN LFLAILVSLS VGALIGAVSG VLVAKVNIPS 

       130        140        150        160        170        180 
LIATMGMVTI TRGILLLYTG GYPVSGFNNV LSAIGNDYFL GIPIPVIVFF TGIILSFIVL 

       190        200        210        220        230        240 
SYTKFGRYVF AVGGNEGAAR LSGINVDKYK ILVFIINGCF AALAGIILVS RLGTATPVAG 

       250        260        270        280        290        300 
EGYELDAIAS AVIGGTSVSG GEGNILMTII GVLLISVISN SFNLLGVNIY FQYIFKGLII 

       310 
LAAVGLDSYS KRKK 

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References

[1]"The complete chromosome of Sebaldella termitidis ATCC 33386."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Sims D., Meincke L., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P., Woyke T., Wu D., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33386 / NCTC 11300.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001739 Genomic DNA. Translation: ACZ10288.1.
RefSeqYP_003310219.1. NC_013517.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ10288; ACZ10288; Sterm_3449.
GeneID8598900.
KEGGstr:Sterm_3449.
PATRIC32410936. VBISebTer81212_3503.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000212232.
KOK10440.
OMARLESAMP.

Family and domain databases

InterProIPR001851. ABC_transp_permease.
[Graphical view]
PfamPF02653. BPD_transp_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD1AQM8_SEBTE
AccessionPrimary (citable) accession number: D1AQM8
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)