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D1AN48 (D1AN48_SEBTE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sterm_2808 EMBL ACZ09652.1
OrganismSebaldella termitidis (strain ATCC 33386 / NCTC 11300) [Complete proteome] [HAMAP] EMBL ACZ09652.1
Taxonomic identifier526218 [NCBI]
Taxonomic lineageBacteriaFusobacteriaFusobacterialesLeptotrichiaceaeSebaldella

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D1AN48 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 8C8A0FE733539B7C

FASTA48155,518
        10         20         30         40         50         60 
MENGVMIQYF EWNLPADKKH WKRLADDAEH LKDIGINAVW IPPATKGTSD LDVGYGAYDL 

        70         80         90        100        110        120 
YDLGEFDQKG TVATKYGTKE ELITAIEALH EREISVYLDA VMNHKAGADE TERFMVQEVD 

       130        140        150        160        170        180 
PNDRNKAISD PYEIEGWTKF NFDGRNNKYS DFKWHWYHFN GTDYNNINQK TAIYKMTGDG 

       190        200        210        220        230        240 
KNWDQGVDDE NGNYDYLMFA NIDYERGDVV EEMKRWGVWV ANELNLDGFR LDAIKHINNN 

       250        260        270        280        290        300 
FIEEFLKEVR KVRGEDFYAV GEYWKGDLGS IVEYLDNVNY QADLFDVPLH FNFFTASKNG 

       310        320        330        340        350        360 
SAYDLREVFN NSLVINKKLF SVTFVDNHDS QWGSSLESQI DSWFKPLAYA LILLIADGYP 

       370        380        390        400        410        420 
CIFYGDYYGV GGKESPHRWV IEKLLYARKN YAYGEQINYF DDPNLIGMVR KGNEDHPGSG 

       430        440        450        460        470        480 
LVMLLSNHTE GTKKINIGKE HAGEVWYEIT ENIKDEIHID DNGEAEFKVN AGKAAVWVKK 


Q 

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References

[1]"The complete chromosome of Sebaldella termitidis ATCC 33386."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Sims D., Meincke L., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.F., Hugenholtz P., Woyke T., Wu D., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33386 / NCTC 11300.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001739 Genomic DNA. Translation: ACZ09652.1.
RefSeqYP_003309583.1. NC_013517.1.

3D structure databases

ProteinModelPortalD1AN48.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ09652; ACZ09652; Sterm_2808.
GeneID8598263.
KEGGstr:Sterm_2808.
PATRIC32409604. VBISebTer81212_2851.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycSTER526218:GHLD-2825-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD1AN48_SEBTE
AccessionPrimary (citable) accession number: D1AN48
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: May 14, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)