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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Sterm_2808

Organism
Sebaldella termitidis (strain ATCC 33386 / NCTC 11300)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei232 – 2321NucleophileUniRule annotation
Active sitei262 – 2621Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSTER526218:GHLD-2825-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Sterm_2808Imported
OrganismiSebaldella termitidis (strain ATCC 33386 / NCTC 11300)Imported
Taxonomic identifieri526218 [NCBI]
Taxonomic lineageiBacteriaFusobacteriaFusobacterialesLeptotrichiaceaeSebaldella
ProteomesiUP000000845 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi526218.Sterm_2808.

Structurei

3D structure databases

ProteinModelPortaliD1AN48.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D1AN48-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENGVMIQYF EWNLPADKKH WKRLADDAEH LKDIGINAVW IPPATKGTSD
60 70 80 90 100
LDVGYGAYDL YDLGEFDQKG TVATKYGTKE ELITAIEALH EREISVYLDA
110 120 130 140 150
VMNHKAGADE TERFMVQEVD PNDRNKAISD PYEIEGWTKF NFDGRNNKYS
160 170 180 190 200
DFKWHWYHFN GTDYNNINQK TAIYKMTGDG KNWDQGVDDE NGNYDYLMFA
210 220 230 240 250
NIDYERGDVV EEMKRWGVWV ANELNLDGFR LDAIKHINNN FIEEFLKEVR
260 270 280 290 300
KVRGEDFYAV GEYWKGDLGS IVEYLDNVNY QADLFDVPLH FNFFTASKNG
310 320 330 340 350
SAYDLREVFN NSLVINKKLF SVTFVDNHDS QWGSSLESQI DSWFKPLAYA
360 370 380 390 400
LILLIADGYP CIFYGDYYGV GGKESPHRWV IEKLLYARKN YAYGEQINYF
410 420 430 440 450
DDPNLIGMVR KGNEDHPGSG LVMLLSNHTE GTKKINIGKE HAGEVWYEIT
460 470 480
ENIKDEIHID DNGEAEFKVN AGKAAVWVKK Q
Length:481
Mass (Da):55,518
Last modified:January 19, 2010 - v1
Checksum:i8C8A0FE733539B7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001739 Genomic DNA. Translation: ACZ09652.1.
RefSeqiWP_012862246.1. NC_013517.1.
YP_003309583.1. NC_013517.1.

Genome annotation databases

EnsemblBacteriaiACZ09652; ACZ09652; Sterm_2808.
KEGGistr:Sterm_2808.
PATRICi32409604. VBISebTer81212_2851.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001739 Genomic DNA. Translation: ACZ09652.1.
RefSeqiWP_012862246.1. NC_013517.1.
YP_003309583.1. NC_013517.1.

3D structure databases

ProteinModelPortaliD1AN48.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi526218.Sterm_2808.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACZ09652; ACZ09652; Sterm_2808.
KEGGistr:Sterm_2808.
PATRICi32409604. VBISebTer81212_2851.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciSTER526218:GHLD-2825-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33386 / NCTC 11300Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33386 / NCTC 11300Imported.

Entry informationi

Entry nameiD1AN48_SEBTE
AccessioniPrimary (citable) accession number: D1AN48
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: June 24, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.