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Protein
Submitted name:

Putative hydrogenase-1 large subunit

Gene

STM14_1856

Organism
Salmonella typhimurium (strain 14028s / SGSC 2262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ferredoxin hydrogenase activity Source: InterPro
  2. nickel cation binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation, NickelUniRule annotation

Enzyme and pathway databases

BioCyciSENT588858:GJDZ-1857-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative hydrogenase-1 large subunitImported
Gene namesi
Ordered Locus Names:STM14_1856Imported
OrganismiSalmonella typhimurium (strain 14028s / SGSC 2262)Imported
Taxonomic identifieri588858 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000002695 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiD0ZXL0.

Structurei

3D structure databases

ProteinModelPortaliD0ZXL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.UniRule annotation

Phylogenomic databases

OMAiIVQVHTI.

Family and domain databases

Gene3Di1.10.645.10. 2 hits.
InterProiIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view]
PfamiPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
SUPFAMiSSF56762. SSF56762. 1 hit.
PROSITEiPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0ZXL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYPYQTQGF TLDNSGRRIV VDPVTRIEGH MRCEVNIDSN NVITNAVSTG
60 70 80 90 100
TMWRGLEVIL KGRDPRDAWA FVERICGVCT GTHALTSIRA VENALGIAIP
110 120 130 140 150
DNANCIRNMM QATLHVHDHL VHFYHLHALD WVDVVAALKA DPHQTSAIAQ
160 170 180 190 200
SLSAWPLSSP GYFRDLQNRL KRFIESGQLG PFRNGYWGHP AMKLPPEANL
210 220 230 240 250
LAVAHYLEAL DFQKEIVKIH TVFGGKNPHP NWLVGGVPCA INLDETGAVG
260 270 280 290 300
AVNMERLNLV SSIIQKARQF CEQVYLPDVL LIASYYKDWA KIGGGLSSMN
310 320 330 340 350
LLAYGEFPDN PNDYSASNLL LPRGAIINGR FDEIHPVDLT APDEIQEFVT
360 370 380 390 400
HSWYTYGNGN NDKGLHPWDG LTEPQLVMGE HYKGTKTFIE QVDESAKYSW
410 420 430 440 450
IKSPRWKGHA MEVGPLARYL IGYHQNKPEF KEPVDQLLSV LKLPKEALFS
460 470 480 490 500
TLGRTAARAL ESVWAGNTLQ YFFDRLMRNL KSGDTATANV TLWEPDTWPT
510 520 530 540 550
SAKGVGFSEA PRGALGHWIK IANQKIDSYQ CVVPTTWNAG PRDDKGQIGA
560 570 580 590 600
YEAALMGTKL AVPDQPLEIL RTLHSFDPCL ACSTHVIDNH GGELVRVQVR
Length:600
Mass (Da):66,747
Last modified:January 19, 2010 - v1
Checksum:i6E8DF4B4D6B382B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001363 Genomic DNA. Translation: ACY88328.1.
RefSeqiYP_005237424.1. NC_016856.1.

Genome annotation databases

EnsemblBacteriaiACY88328; ACY88328; STM14_1856.
PATRICi36734603. VBISalEnt101322_1771.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001363 Genomic DNA. Translation: ACY88328.1.
RefSeqiYP_005237424.1. NC_016856.1.

3D structure databases

ProteinModelPortaliD0ZXL0.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiD0ZXL0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY88328; ACY88328; STM14_1856.
PATRICi36734603. VBISalEnt101322_1771.

Phylogenomic databases

OMAiIVQVHTI.

Enzyme and pathway databases

BioCyciSENT588858:GJDZ-1857-MONOMER.

Family and domain databases

Gene3Di1.10.645.10. 2 hits.
InterProiIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view]
PfamiPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
SUPFAMiSSF56762. SSF56762. 1 hit.
PROSITEiPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome."
    Jarvik T., Smillie C., Groisman E.A., Ochman H.
    J. Bacteriol. 192:560-567(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 14028s / SGSC 2262Imported.

Entry informationi

Entry nameiD0ZXL0_SALT1
AccessioniPrimary (citable) accession number: D0ZXL0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: January 7, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.