D0ZU15 (D0ZU15_SALT1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ACY89787.1

Gene names

Name:	gabT EMBL ACY89787.1
Ordered Locus Names:	STM14_3368 EMBL ACY89787.1

Organism

Salmonella typhimurium (strain 14028s / SGSC 2262) [Complete proteome] [HAMAP] EMBL ACY89787.1

Taxonomic identifier

588858 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella choleraesuis › Salmonella enterica I › Salmonella typhimurium › Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ACY89787.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0ZU15 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: 9B8DD5E7B3B5AC21	FASTA	427	45,636
	10 20 30 40 50 60 MNTNNALMQR RHNAVPRGVG QIHPIFAERA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP 70 80 90 100 110 120 GIVSAVEAQL KKLSHTCFQV LAYEPYLALC ERMNQKVPGD FAKKTLLVTT GSEAVENAVK 130 140 150 160 170 180 IARAATKRSG AIAFSGAYHG RTHYTLSLTG KVHPYSAGMG LMPGHVYRAL YPCPLHNISD 190 200 210 220 230 240 DDAIASIERI FKNDAAPEDI AAIIIEPVQG EGGFYAASPA FMQRLRALCD QHGIMLIADE 250 260 270 280 290 300 VQSGAGRTGT LFAMEQMGVA ADITTFAKSI AGGFPLAGVT GRADVMDAIA PGGLGGTYAG 310 320 330 340 350 360 NPIACAAALA VLDIFEQENL LQKANTLGKT LRDGLMEIAE THREIGDVRG LGAMIAIELF 370 380 390 400 410 420 ENGDPGKPNA ALTADIVTRA REKGLILLSC GPYYNILRIL VPLTIEASQI RQGLEIIAQC FDEAKQA

References

[1]

"Short-term Signatures of Evolutionary Change in the Salmonella enterica serovar Typhimurium 14028 Genome." Jarvik T., Smillie C., Groisman E.A., Ochman H. J. Bacteriol. 192:560-567(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 14028s / SGSC 2262.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001363 Genomic DNA. Translation: ACY89787.1.
RefSeq	YP_005238883.1. NC_016856.1.
3D structure databases
ProteinModelPortal	D0ZU15.
SMR	D0ZU15. Positions 2-426.
ModBase	Search...
Proteomic databases
PRIDE	D0ZU15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACY89787; ACY89787; STM14_3368.
GeneID	11754547.
KEGG	seo:STM14_3368.
PATRIC	36737331. VBISalEnt101322_3111.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K07250.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0ZU15_SALT1

Accession

Primary (citable) accession number: D0ZU15

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)