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Protein
Submitted name:

Ribokinase

Gene

rbsK

Organism
Salmonella typhimurium (strain 14028s / SGSC 2262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ribokinase activity Source: InterPro

GO - Biological processi

  1. D-ribose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationSAAS annotation, Transferase

Enzyme and pathway databases

BioCyciSENT588858:GJDZ-4686-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RibokinaseImported
Gene namesi
Name:rbsKImported
Ordered Locus Names:STM14_4682Imported
OrganismiSalmonella typhimurium (strain 14028s / SGSC 2262)Imported
Taxonomic identifieri588858 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000002695 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiD0ZMV6.

Structurei

3D structure databases

SMRiD0ZMV6. Positions 2-308.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the carbohydrate kinase PfkB family.UniRule annotation

Phylogenomic databases

OMAiNGALMTA.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011877. D_ribokin_bac.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSiPR00990. RIBOKINASE.
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR02152. D_ribokin_bact. 1 hit.
PROSITEiPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0ZMV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTAGNLIVL GSINADHILN LESFPTPGET VTGSHYQVAF GGKGANQAVA
60 70 80 90 100
AGRSGANIAF IACTGDDDIG DSIRKQLVSD RIDIAPVSVI KGESTGVALI
110 120 130 140 150
FVNGEGENVI GIHAGANAAL SPALVDAQRE RIAQADALLM QLESPLESVL
160 170 180 190 200
AAAKIAHQHH TTVALNPAPA RELPDELLAL VDIITPNETE AEKLTGVRVE
210 220 230 240 250
NDDDAAKAAQ VLHDKGIRTV LITLGSRGVW ASVDGEGRRV PGFSVEAVDT
260 270 280 290 300
IAAGDTFNGA FITAILEETP LPEAIRFAHA AAAIAVTRKG AQPSVPWREE

IEAFLHQQG
Length:309
Mass (Da):32,211
Last modified:January 18, 2010 - v1
Checksum:iA906DA0EE80E64BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001363 Genomic DNA. Translation: ACY91058.1.
RefSeqiYP_005240154.1. NC_016856.1.

Genome annotation databases

EnsemblBacteriaiACY91058; ACY91058; STM14_4682.
PATRICi36739689. VBISalEnt101322_4269.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001363 Genomic DNA. Translation: ACY91058.1.
RefSeqiYP_005240154.1. NC_016856.1.

3D structure databases

SMRiD0ZMV6. Positions 2-308.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiD0ZMV6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY91058; ACY91058; STM14_4682.
PATRICi36739689. VBISalEnt101322_4269.

Phylogenomic databases

OMAiNGALMTA.

Enzyme and pathway databases

BioCyciSENT588858:GJDZ-4686-MONOMER.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011877. D_ribokin_bac.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSiPR00990. RIBOKINASE.
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR02152. D_ribokin_bact. 1 hit.
PROSITEiPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome."
    Jarvik T., Smillie C., Groisman E.A., Ochman H.
    J. Bacteriol. 192:560-567(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 14028s / SGSC 2262Imported.

Entry informationi

Entry nameiD0ZMV6_SALT1
AccessioniPrimary (citable) accession number: D0ZMV6
Entry historyi
Integrated into UniProtKB/TrEMBL: January 18, 2010
Last sequence update: January 18, 2010
Last modified: March 31, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.