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D0ZKP1

- D0ZKP1_SALT1

UniProt

D0ZKP1 - D0ZKP1_SALT1

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Salmonella typhimurium (strain 14028s / SGSC 2262)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciSENT588858:GJDZ-4424-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    Name:malSImported
    Ordered Locus Names:STM14_4420Imported
    OrganismiSalmonella typhimurium (strain 14028s / SGSC 2262)Imported
    Taxonomic identifieri588858 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
    ProteomesiUP000002695: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD0ZKP1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    D0ZKP1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT    50
    LHIDQQCWQP SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT 100
    PTLLLSIKTE PERTAQLAYQ CPVWDGSPLT LDVRQTFPEG TVVRDYYSGQ 150
    TDTVQNGQIT LQPADSHGLL LLERAETHAP APFNWRNATV YFVLTDRFRN 200
    GDPTNDHSYS RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL GVNALWISSP 250
    FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH 300
    QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR 350
    PAAGQSWHSF NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL 400
    AFLPDIKTES TTPSGLPAFY ANKPDTKAKF IEGYTPRDYL THWLSQWVHD 450
    YGIDGFRVDT AKNVELPAWQ QLKTQASAAL REWKQANPDK ALDNSPFWMT 500
    GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMTDK 550
    MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP 600
    TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL 650
    TLKHGYGFVR QYGDDTVMVV WAGRR 675
    Length:675
    Mass (Da):75,742
    Last modified:January 19, 2010 - v1
    Checksum:i711E25C319D7EFB9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001363 Genomic DNA. Translation: ACY90804.1.
    RefSeqiYP_005239900.1. NC_016856.1.

    Genome annotation databases

    EnsemblBacteriaiACY90804; ACY90804; STM14_4420.
    PATRICi36739211. VBISalEnt101322_4031.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001363 Genomic DNA. Translation: ACY90804.1 .
    RefSeqi YP_005239900.1. NC_016856.1.

    3D structure databases

    ProteinModelPortali D0ZKP1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY90804 ; ACY90804 ; STM14_4420 .
    PATRICi 36739211. VBISalEnt101322_4031.

    Enzyme and pathway databases

    BioCyci SENT588858:GJDZ-4424-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome."
      Jarvik T., Smillie C., Groisman E.A., Ochman H.
      J. Bacteriol. 192:560-567(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 14028s / SGSC 2262Imported.

    Entry informationi

    Entry nameiD0ZKP1_SALT1
    AccessioniPrimary (citable) accession number: D0ZKP1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3