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D0ZKP1

- D0ZKP1_SALT1

UniProt

D0ZKP1 - D0ZKP1_SALT1

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Protein
Submitted name: Periplasmic alpha-amylase
Gene
malS, STM14_4420
Organism
Salmonella typhimurium (strain 14028s / SGSC 2262)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSENT588858:GJDZ-4424-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
Name:malSImported
Ordered Locus Names:STM14_4420Imported
OrganismiSalmonella typhimurium (strain 14028s / SGSC 2262)Imported
Taxonomic identifieri588858 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000002695: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD0ZKP1.

Family & Domainsi

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D0ZKP1-1 [UniParc]FASTAAdd to Basket

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MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT    50
LHIDQQCWQP SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT 100
PTLLLSIKTE PERTAQLAYQ CPVWDGSPLT LDVRQTFPEG TVVRDYYSGQ 150
TDTVQNGQIT LQPADSHGLL LLERAETHAP APFNWRNATV YFVLTDRFRN 200
GDPTNDHSYS RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL GVNALWISSP 250
FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH 300
QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR 350
PAAGQSWHSF NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL 400
AFLPDIKTES TTPSGLPAFY ANKPDTKAKF IEGYTPRDYL THWLSQWVHD 450
YGIDGFRVDT AKNVELPAWQ QLKTQASAAL REWKQANPDK ALDNSPFWMT 500
GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMTDK 550
MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP 600
TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL 650
TLKHGYGFVR QYGDDTVMVV WAGRR 675
Length:675
Mass (Da):75,742
Last modified:January 19, 2010 - v1
Checksum:i711E25C319D7EFB9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001363 Genomic DNA. Translation: ACY90804.1.
RefSeqiYP_005239900.1. NC_016856.1.

Genome annotation databases

EnsemblBacteriaiACY90804; ACY90804; STM14_4420.
PATRICi36739211. VBISalEnt101322_4031.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001363 Genomic DNA. Translation: ACY90804.1 .
RefSeqi YP_005239900.1. NC_016856.1.

3D structure databases

ProteinModelPortali D0ZKP1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY90804 ; ACY90804 ; STM14_4420 .
PATRICi 36739211. VBISalEnt101322_4031.

Enzyme and pathway databases

BioCyci SENT588858:GJDZ-4424-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome."
    Jarvik T., Smillie C., Groisman E.A., Ochman H.
    J. Bacteriol. 192:560-567(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 14028s / SGSC 2262.

Entry informationi

Entry nameiD0ZKP1_SALT1
AccessioniPrimary (citable) accession number: D0ZKP1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: February 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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