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D0ZDS2

- D0ZDS2_EDWTE

UniProt

D0ZDS2 - D0ZDS2_EDWTE

Protein

Glutamate decarboxylase

Gene

gadB2

Organism
Edwardsiella tarda (strain EIB202)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (19 Jan 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciETAR498217:GJC4-2954-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadB2Imported
    Ordered Locus Names:ETAE_2868Imported
    OrganismiEdwardsiella tarda (strain EIB202)Imported
    Taxonomic identifieri498217 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
    ProteomesiUP000002634: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD0ZDS2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR021115. Pyridoxal-P_BS.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
    PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0ZDS2-1 [UniParc]FASTAAdd to Basket

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    MKKGTDTRGG YLDSRFGSEA IRTAAEAHHF PQGEMREDIA FQVINDELFL    50
    DGNARQNLAT FCQTWDDDYV HRLMDISINK NWIDKEEYPQ SAAIDLRCVN 100
    MVADLWHAPR PADGQAVGTN TIGSSEACML GGMAMKWRWR AKRLAQGKSV 150
    DKPNMVCGPV QVCWHKFARY WDVELREIPM APGKLFMDPE RMIAACDENT 200
    IGVVPTFGVT YTGNYEMPDV LHKALDDLQA RTGLDIDMHV DAASGGFLAP 250
    FCAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVVWRDA ASLPDDLIFK 300
    VDYLGGQVGT FAINFSRPAG QVIAQYYEFL RLGREGYTKV HTASYQVAQF 350
    LAAEIAKLGP YEFICSGDPQ QGIPAVCFRI PAGKALGYSL YDLSERLRLR 400
    GWQVPAFALN GEMSDVVVMR IMCRRGFEMD FAQLLMEDFR AALAYLKAHP 450
    AVANVAHQNS FKHS 464
    Length:464
    Mass (Da):51,801
    Last modified:January 19, 2010 - v1
    Checksum:i4C91197AC5608011
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001135 Genomic DNA. Translation: ACY85701.1.
    RefSeqiWP_012849691.1. NC_013508.1.
    YP_003296912.1. NC_013508.1.

    Genome annotation databases

    EnsemblBacteriaiACY85701; ACY85701; ETAE_2868.
    GeneIDi8609212.
    KEGGietr:ETAE_2868.
    PATRICi32080804. VBIEdwTar116525_2650.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001135 Genomic DNA. Translation: ACY85701.1 .
    RefSeqi WP_012849691.1. NC_013508.1.
    YP_003296912.1. NC_013508.1.

    3D structure databases

    ProteinModelPortali D0ZDS2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY85701 ; ACY85701 ; ETAE_2868 .
    GeneIDi 8609212.
    KEGGi etr:ETAE_2868.
    PATRICi 32080804. VBIEdwTar116525_2650.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci ETAR498217:GJC4-2954-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR021115. Pyridoxal-P_BS.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches."
      Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y.
      PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EIB202Imported.

    Entry informationi

    Entry nameiD0ZDS2_EDWTE
    AccessioniPrimary (citable) accession number: D0ZDS2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 19, 2010
    Last sequence update: January 19, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3