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D0ZDS2 (D0ZDS2_EDWTE) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gadB2 EMBL ACY85701.1
Ordered Locus Names:ETAE_2868 EMBL ACY85701.1
OrganismEdwardsiella tarda (strain EIB202) [Complete proteome] [HAMAP] EMBL ACY85701.1
Taxonomic identifier498217 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D0ZDS2 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 4C91197AC5608011

FASTA46451,801
        10         20         30         40         50         60 
MKKGTDTRGG YLDSRFGSEA IRTAAEAHHF PQGEMREDIA FQVINDELFL DGNARQNLAT 

        70         80         90        100        110        120 
FCQTWDDDYV HRLMDISINK NWIDKEEYPQ SAAIDLRCVN MVADLWHAPR PADGQAVGTN 

       130        140        150        160        170        180 
TIGSSEACML GGMAMKWRWR AKRLAQGKSV DKPNMVCGPV QVCWHKFARY WDVELREIPM 

       190        200        210        220        230        240 
APGKLFMDPE RMIAACDENT IGVVPTFGVT YTGNYEMPDV LHKALDDLQA RTGLDIDMHV 

       250        260        270        280        290        300 
DAASGGFLAP FCAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVVWRDA ASLPDDLIFK 

       310        320        330        340        350        360 
VDYLGGQVGT FAINFSRPAG QVIAQYYEFL RLGREGYTKV HTASYQVAQF LAAEIAKLGP 

       370        380        390        400        410        420 
YEFICSGDPQ QGIPAVCFRI PAGKALGYSL YDLSERLRLR GWQVPAFALN GEMSDVVVMR 

       430        440        450        460 
IMCRRGFEMD FAQLLMEDFR AALAYLKAHP AVANVAHQNS FKHS 

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References

[1]"Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches."
Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y.
PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EIB202 EMBL ACY85701.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001135 Genomic DNA. Translation: ACY85701.1.
RefSeqYP_003296912.1. NC_013508.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY85701; ACY85701; ETAE_2868.
GeneID8609212.
KEGGetr:ETAE_2868.
PATRIC32080804. VBIEdwTar116525_2650.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycETAR498217:GJC4-2954-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0ZDS2_EDWTE
AccessionPrimary (citable) accession number: D0ZDS2
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: November 13, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)