D0ZDS2 (D0ZDS2_EDWTE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ACY85701.1

Gene names

Name:	gadB2 EMBL ACY85701.1
Ordered Locus Names:	ETAE_2868 EMBL ACY85701.1

Organism

Edwardsiella tarda (strain EIB202) [Complete proteome] [HAMAP] EMBL ACY85701.1

Taxonomic identifier

498217 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Edwardsiella › Edwardsiella tarda

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0ZDS2 [UniParc]. Last modified January 19, 2010. Version 1. Checksum: 4C91197AC5608011	FASTA	464	51,801
	10 20 30 40 50 60 MKKGTDTRGG YLDSRFGSEA IRTAAEAHHF PQGEMREDIA FQVINDELFL DGNARQNLAT 70 80 90 100 110 120 FCQTWDDDYV HRLMDISINK NWIDKEEYPQ SAAIDLRCVN MVADLWHAPR PADGQAVGTN 130 140 150 160 170 180 TIGSSEACML GGMAMKWRWR AKRLAQGKSV DKPNMVCGPV QVCWHKFARY WDVELREIPM 190 200 210 220 230 240 APGKLFMDPE RMIAACDENT IGVVPTFGVT YTGNYEMPDV LHKALDDLQA RTGLDIDMHV 250 260 270 280 290 300 DAASGGFLAP FCAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVVWRDA ASLPDDLIFK 310 320 330 340 350 360 VDYLGGQVGT FAINFSRPAG QVIAQYYEFL RLGREGYTKV HTASYQVAQF LAAEIAKLGP 370 380 390 400 410 420 YEFICSGDPQ QGIPAVCFRI PAGKALGYSL YDLSERLRLR GWQVPAFALN GEMSDVVVMR 430 440 450 460 IMCRRGFEMD FAQLLMEDFR AALAYLKAHP AVANVAHQNS FKHS

References

[1]

"Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches." Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y. PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EIB202 EMBL ACY85701.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001135 Genomic DNA. Translation: ACY85701.1.
RefSeq	YP_003296912.1. NC_013508.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACY85701; ACY85701; ETAE_2868.
GeneID	8609212.
KEGG	etr:ETAE_2868.
PATRIC	32080804. VBIEdwTar116525_2650.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	IELREVP.
Enzyme and pathway databases
BioCyc	ETAR498217:GJC4-2954-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR021115. Pyridoxal-P_BS. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0ZDS2_EDWTE

Accession

Primary (citable) accession number: D0ZDS2

Entry history

Integrated into UniProtKB/TrEMBL:	January 19, 2010
Last sequence update:	January 19, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)