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D0ZD72 (D0ZD72_EDWTE) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histidine--tRNA ligase HAMAP-Rule MF_00127
EC=6.1.1.21 HAMAP-Rule MF_00127
Alternative name(s):
Histidyl-tRNA synthetase HAMAP-Rule MF_00127
Gene names
Name:hisS HAMAP-Rule MF_00127 EMBL ACY85634.1
Ordered Locus Names:ETAE_2801 EMBL ACY85634.1
OrganismEdwardsiella tarda (strain EIB202) [Complete proteome] [HAMAP] EMBL ACY85634.1
Taxonomic identifier498217 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Edwardsiella ›

Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His). HAMAP-Rule MF_00127 SAAS SAAS015807

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00127

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00127.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00127 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
D0ZD72 [UniParc].

Last modified January 19, 2010. Version 1.
Checksum: 0AA2B90A33C70BB7

FASTA42447,099
        10         20         30         40         50         60 
MAKNIQAIRG MNDYLPADTA LWQPIEAALK QVLASYGYSE IRLPIVEQTP LFKRAIGEVT 

        70         80         90        100        110        120 
DVVEKEMYTF EDRNGDSLTL RPEGTAGCVR AGIEHGLLYN QEQRLWYIGP MFRHERPQKG 

       130        140        150        160        170        180 
RYRQFHQLGA EVFGLAGPDI DAEIIMMTAR WWKVLGIADH VALELNSIGS LEARAAYRDA 

       190        200        210        220        230        240 
LVAYLEQYKN QLDEDCQRRM YSNPLRVLDS KNPQVQALLN EAPRLSEYLD ADSREHFDGL 

       250        260        270        280        290        300 
CRLLDDAGIA YTVNERLVRG LDYYNRTVFE WVTTSLGAQG TVCAGGRYDG LVAQLGGHAT 

       310        320        330        340        350        360 
PAVGFAMGLE RLVLLVQAVN PDFLPQRAVE VYLIAAGEGT QSAAMRLAEQ LRDALPQLRL 

       370        380        390        400        410        420 
MTNYGGGNFK KQFARADKWG ARIALVLGES EVQNGQVNVK CLASGEQQTV AQDQAATLLA 


TLLG

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References

[1]"Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches."
Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y.
PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EIB202 EMBL ACY85634.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001135 Genomic DNA. Translation: ACY85634.1.
RefSeqYP_003296845.1. NC_013508.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY85634; ACY85634; ETAE_2801.
GeneID8609145.
KEGGetr:ETAE_2801.
PATRIC32080654. VBIEdwTar116525_2586.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000018072.
KOK01892.
OMACGGGNFK.

Enzyme and pathway databases

BioCycETAR498217:GJC4-2876-MONOMER.

Family and domain databases

Gene3D3.40.50.800. 1 hit.
HAMAPMF_00127. His_tRNA_synth.
InterProIPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
[Graphical view]
PANTHERPTHR11476. PTHR11476. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
[Graphical view]
PIRSFPIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMSSF52954. Anticodon_bd. 1 hit.
TIGRFAMsTIGR00442. hisS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0ZD72_EDWTE
AccessionPrimary (citable) accession number: D0ZD72
Entry history
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: May 29, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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