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Protein
Submitted name:

Component of the 2-oxoglutarate dehydrogenase complex,thiamin-binding protein

Gene

sucA

Organism
Edwardsiella tarda (strain EIB202)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciETAR498217:GJC4-2652-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Component of the 2-oxoglutarate dehydrogenase complex,thiamin-binding proteinImported
Gene namesi
Name:sucAImported
Ordered Locus Names:ETAE_2584Imported
OrganismiEdwardsiella tarda (strain EIB202)Imported
Taxonomic identifieri498217 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
ProteomesiUP000002634 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi498217.ETAE_2584.

Structurei

3D structure databases

ProteinModelPortaliD0ZC80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259587.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

D0ZC80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNGTMKAWL DSSYLAGANQ SYIEQLYEDY LTDPDSVEGS WKTLFQQLPV
60 70 80 90 100
NGLPPDQLHS QTREYFRRLA KDPTRFGLAF NDPQTDAKQV KVLQLINAFR
110 120 130 140 150
FRGHQQANLD PLGLWKQESV ADLDPAFHHL TPEDFNETFN VGSFAIGSDT
160 170 180 190 200
LRLADLYRAL QQTYCGTIGA EYMHLTNTDE KRWLQQRLES VMGQPAFSPQ
210 220 230 240 250
EKRRFLQELT AAEGLERYLG AKFPGAKRFS LEGGDALIPM LKELIRHAGR
260 270 280 290 300
NGTREVVLGM AHRGRLNVLI NVLGKCAGEL FDEFAGKHKD HLGTGDVKYH
310 320 330 340 350
MGFSSDMETE GGPVHLALAF NPSHLEIVSP VVMGSVRARR DRLDRTRSDI
360 370 380 390 400
VLPITIHGDA AVAGQGIVQE TLNMSQARGY EVGGTVRIVI NNQIGFTTSN
410 420 430 440 450
PLDARSTQYC TDIGKMVQAP IFHVNADDPE AVAFVTQLAL DFRNCFKRDV
460 470 480 490 500
FIDLVCYRRH GHNEADEPSA TQPVMYQKIK KHPTPRKLYA DRLTEQGVIT
510 520 530 540 550
LEDATEMVNL YRDALDGGGC VVAEWRPMTM HSVTWDPYLH HEWDEPYPHA
560 570 580 590 600
VAPQRLQDLA RCISRVPEAV EMQARVAKIY ADRAEMAEGK RPFDWGGAEN
610 620 630 640 650
LAYATLVDEG IPVRISGEDC GRGTFFHRHA VIHSQRDGAV YVPLENVHNG
660 670 680 690 700
QGDFKVWDSV LSEAAVLAFE YGYASAEPRT LTIWEAQFGD FANGAQVVID
710 720 730 740 750
QFISSGEQKW GRLCGLVMLL PHGYEGQGPE HSSARLERYL QLCAQQNIQV
760 770 780 790 800
CVPSTPAQVY HMLRRQALRA MRRPLVVMSP KSLLRHPLAV SSLDELAQGC
810 820 830 840 850
FQPAIGEIDP LDAQRVKRVV MCSGKVYYDL LEQRRKNGQD NVAIVRIEQL
860 870 880 890 900
YPFPHQAVQA VLAPYTQARD FVWCQEEPLN QGAWYCSQHN FREVIPFGAV
910 920 930
LRYAGRPASA SPAVGYLSVH REQQQALVDD ALNVE
Length:935
Mass (Da):104,954
Last modified:January 19, 2010 - v1
Checksum:iBF27240357A99538
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001135 Genomic DNA. Translation: ACY85419.1.
RefSeqiWP_012849411.1. NC_013508.1.

Genome annotation databases

EnsemblBacteriaiACY85419; ACY85419; ETAE_2584.
KEGGietr:ETAE_2584.
PATRICi32080220. VBIEdwTar116525_2377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001135 Genomic DNA. Translation: ACY85419.1.
RefSeqiWP_012849411.1. NC_013508.1.

3D structure databases

ProteinModelPortaliD0ZC80.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi498217.ETAE_2584.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY85419; ACY85419; ETAE_2584.
KEGGietr:ETAE_2584.
PATRICi32080220. VBIEdwTar116525_2377.

Phylogenomic databases

HOGENOMiHOG000259587.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciETAR498217:GJC4-2652-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches."
    Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y.
    PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EIB202Imported.

Entry informationi

Entry nameiD0ZC80_EDWTE
AccessioniPrimary (citable) accession number: D0ZC80
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: July 22, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.