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D0Z7S8

- D0Z7S8_EDWTE

UniProt

D0Z7S8 - D0Z7S8_EDWTE

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Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Edwardsiella tarda (strain EIB202)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciETAR498217:GJC4-1715-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
Name:malSImported
Ordered Locus Names:ETAE_1656Imported
OrganismiEdwardsiella tarda (strain EIB202)Imported
Taxonomic identifieri498217 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
ProteomesiUP000002634: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD0Z7S8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D0Z7S8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKYAVFAALL LPLAAGADWR SPAFPQFVAV DEGRFSASQP LAKGEAPRWR
60 70 80 90 100
RFRDGRYQAL VDTRSGTPTL TLSVHDEAAQ RAAAAARRCP RWDGRPLRVP
110 120 130 140 150
VDRAFSEGSL VRDFYSGEVA RVTQGTVTLQ PALGSNGLLL LESAETAGPA
160 170 180 190 200
PFDWHNATVY FVLVDRFANG DPSNDNSYGR QKDGMQEIGT FHGGDLRGLT
210 220 230 240 250
GQLDYLQRLG VNVLWISSPL EQIHGWVGGG SRGDFPHYAY HGYYPLDWTR
260 270 280 290 300
LDANMGSEQD LRALVEGAHR RGIRVLFDVV MNHTGYATLA DMQQYQFGAL
310 320 330 340 350
FLQGETLRQT LGTHWRDWRP GRGQTWHSFN DYIDFGNRAA WARWWGKGWI
360 370 380 390 400
RTDIGDYDAP GFDDVTLSLS FLPDVKTESS AASGLPIFYR HKPDTRAREI
410 420 430 440 450
PGYTPRDYLT HWLSQWVREY GIDGFRIDTA KHVEPAAWQQ LKQQASAALA
460 470 480 490 500
EWKRANPQQA LDDAPFWMTG EAWGHGVMRS AYYRHGFDAM INFDYQEQAA
510 520 530 540 550
RAQGCLADID PLWQQMAAQL QDFNVLSYLS SHDTCLFRSD GSGAAALLLL
560 570 580 590 600
APGAVQIFYG DESGRPLGPT GSDPLQGTRS DMNWQDIRGP AAAQVAHWQR
610 620 630 640
LGQFRARHPA IGKGEQTTVA MPQGYGFIRN DGRDRVMVVW AGQPE
Length:645
Mass (Da):72,078
Last modified:January 19, 2010 - v1
Checksum:iF69989028B40FB71
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001135 Genomic DNA. Translation: ACY84497.1.
RefSeqiWP_012848500.1. NC_013508.1.
YP_003295708.1. NC_013508.1.

Genome annotation databases

EnsemblBacteriaiACY84497; ACY84497; ETAE_1656.
GeneIDi8608004.
KEGGietr:ETAE_1656.
PATRICi32078504. VBIEdwTar116525_1531.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001135 Genomic DNA. Translation: ACY84497.1 .
RefSeqi WP_012848500.1. NC_013508.1.
YP_003295708.1. NC_013508.1.

3D structure databases

ProteinModelPortali D0Z7S8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY84497 ; ACY84497 ; ETAE_1656 .
GeneIDi 8608004.
KEGGi etr:ETAE_1656.
PATRICi 32078504. VBIEdwTar116525_1531.

Phylogenomic databases

HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci ETAR498217:GJC4-1715-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches."
    Wang Q., Yang M., Xiao J., Wu H., Wang X., Lv Y., Xu L., Zheng H., Wang S., Zhao G., Liu Q., Zhang Y.
    PLoS ONE 4:E7646-E7646(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EIB202Imported.

Entry informationi

Entry nameiD0Z7S8_EDWTE
AccessioniPrimary (citable) accession number: D0Z7S8
Entry historyi
Integrated into UniProtKB/TrEMBL: January 19, 2010
Last sequence update: January 19, 2010
Last modified: October 1, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3