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D0VX02

- D0VX02_9FIRM

UniProt

D0VX02 - D0VX02_9FIRM

Protein
Submitted name:

Amino Transferase

Gene

RER070207001803

Organism
Eubacterium rectale
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei72 – 721N6-(pyridoxalphosphate)lysineImported
    Binding sitei134 – 1341N6-(pyridoxalphosphate)lysineImported
    Binding sitei183 – 1831N6-(pyridoxalphosphate)lysineImported
    Binding sitei256 – 2561N6-(pyridoxalphosphate)lysineImported

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseUniRule annotation, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Amino TransferaseImported
    Gene namesi
    ORF Names:RER070207001803Imported
    OrganismiEubacterium rectaleImported
    Taxonomic identifieri39491 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ELEX-ray2.10A/B/C/D1-398[»]
    ProteinModelPortaliD0VX02.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiD0VX02.

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni108 – 1092N6-(pyridoxalphosphate)lysine bindingImported
    Regioni217 – 2204N6-(pyridoxalphosphate)lysine bindingImported
    Regioni245 – 2484N6-(pyridoxalphosphate)lysine bindingImported

    Sequence similaritiesi

    Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR004838. NHTrfase_class1_PyrdxlP-BS.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0VX02-1 [UniParc]FASTAAdd to Basket

    « Hide

    GMVVNESMYQ LGSVRSAIRE LFEYGKKRAA IVGKENVYDF SIGNPSIPAP    50
    QIVNDTIKEL VTDYDSVALH GYTSAQGDVE TRAAIAEFLN NTHGTHFNAD 100
    NLYMTMGAAA SLSICFRALT SDAYDEFITI APYFPEYKVF VNAAGARLVE 150
    VPADTEHFQI DFDALEERIN AHTRGVIINS PNNPSGTVYS EETIKKLSDL 200
    LEKKSKEIGR PIFIIADEPY REIVYDGIKV PFVTKYYDNT LVCYSYSKSL 250
    SLPGERIGYV LVPDEVYDKA ELYAAVCGAG RALGYVCAPS LFQKMIVKCQ 300
    GATGDINAYK ENRDLLYEGL TRIGYHCFKP DGAFYMFVKA LEDDSNAFCE 350
    KAKEEDVLIV AADGFGCPGW VRISYCVDRE MIKHSMPAFE KIYKKYNK 398
    Length:398
    Mass (Da):44,448
    Last modified:December 15, 2009 - v1
    Checksum:iBF4A60C9277B6FAD
    GO

    Cross-referencesi

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ELE X-ray 2.10 A/B/C/D 1-398 [» ]
    ProteinModelPortali D0VX02.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei D0VX02.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR004838. NHTrfase_class1_PyrdxlP-BS.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00105. AA_TRANSFER_CLASS_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of Amino Transferase (RER070207001803) from Eubacterium rectale at 2.10 A resolution."
      Joint Center for Structural Genomics (JCSG)
      Submitted (SEP-2008) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH N6-(PYRIDOXALPHOSPHATE)LYSINE.

    Entry informationi

    Entry nameiD0VX02_9FIRM
    AccessioniPrimary (citable) accession number: D0VX02
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3