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D0VX02 (D0VX02_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:RER070207001803 PDB 3ELE
OrganismEubacterium rectale PDB 3ELE
Taxonomic identifier39491 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000479

Sequence similarities

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region147 – 1482Chloride binding PDB 3ELE

Sites

Binding site1421Chloride PDB 3ELE

Sequences

Sequence LengthMass (Da)Tools
D0VX02 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: BF4A60C9277B6FAD

FASTA39844,448
        10         20         30         40         50         60 
GMVVNESMYQ LGSVRSAIRE LFEYGKKRAA IVGKENVYDF SIGNPSIPAP QIVNDTIKEL 

        70         80         90        100        110        120 
VTDYDSVALH GYTSAQGDVE TRAAIAEFLN NTHGTHFNAD NLYMTMGAAA SLSICFRALT 

       130        140        150        160        170        180 
SDAYDEFITI APYFPEYKVF VNAAGARLVE VPADTEHFQI DFDALEERIN AHTRGVIINS 

       190        200        210        220        230        240 
PNNPSGTVYS EETIKKLSDL LEKKSKEIGR PIFIIADEPY REIVYDGIKV PFVTKYYDNT 

       250        260        270        280        290        300 
LVCYSYSKSL SLPGERIGYV LVPDEVYDKA ELYAAVCGAG RALGYVCAPS LFQKMIVKCQ 

       310        320        330        340        350        360 
GATGDINAYK ENRDLLYEGL TRIGYHCFKP DGAFYMFVKA LEDDSNAFCE KAKEEDVLIV 

       370        380        390 
AADGFGCPGW VRISYCVDRE MIKHSMPAFE KIYKKYNK 

« Hide

References

[1]"Crystal structure of Amino Transferase (RER070207001803) from Eubacterium rectale at 2.10 A resolution."
Joint Center for Structural Genomics (JCSG)
Submitted (SEP-2008) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH CHLORIDE.

Cross-references

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3ELEX-ray2.10A/B/C/D1-398[»]
ProteinModelPortalD0VX02.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceD0VX02.

Entry information

Entry nameD0VX02_9FIRM
AccessionPrimary (citable) accession number: D0VX02
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 16, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)