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D0VWQ6

- D0VWQ6_CANFA

UniProt

D0VWQ6 - D0VWQ6_CANFA

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Protein
Submitted name:

60S Ribosomal protein L10a

Gene
N/A
Organism
Canis familiaris (Dog) (Canis lupus familiaris)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
60S Ribosomal protein L10aImported
OrganismiCanis familiaris (Dog) (Canis lupus familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ZKRelectron microscopy8.7051-212[»]
4UPXelectron microscopy8.90u2-211[»]
4UQ1electron microscopy9.50u2-211[»]
ProteinModelPortaliD0VWQ6.
SMRiD0VWQ6. Positions 2-211.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiD0VWQ6.

Family & Domainsi

Family and domain databases

Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPiMF_01318_A. Ribosomal_L1_A.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023669. Ribosomal_L1_arc.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0VWQ6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADQEIENAV SRALEDAPER NFRETVDLAV NLRDLDLNDP SNRVDESVVL
60 70 80 90 100
PAGTGQETTI VVFAEGETAL RAEEVADDVL DEDELEELGG DDDAAKDLAD
110 120 130 140 150
DTDFFIAEKG LMQDIGRYLG TVLGPRGKMP EPLDPDDDVV EVIERMKNTV
160 170 180 190 200
QLRSGERRTF HTRVGAEDMS AENIADNIDV ILRRLHADLE KGPLNIDTVY
210
VKTTMGPAME VA
Length:212
Mass (Da):23,354
Last modified:December 15, 2009 - v1
Checksum:i46D2F09E6FB1FBE6
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2ZKR electron microscopy 8.70 5 1-212 [» ]
4UPX electron microscopy 8.90 u 2-211 [» ]
4UQ1 electron microscopy 9.50 u 2-211 [» ]
ProteinModelPortali D0VWQ6.
SMRi D0VWQ6. Positions 2-211.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei D0VWQ6.

Family and domain databases

Gene3Di 3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPi MF_01318_A. Ribosomal_L1_A.
InterProi IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023669. Ribosomal_L1_arc.
IPR023673. Ribosomal_L1_CS.
[Graphical view ]
Pfami PF00687. Ribosomal_L1. 1 hit.
[Graphical view ]
PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMi SSF56808. SSF56808. 1 hit.
PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.70 ANGSTROMS).
  2. "Structure of the mammalian 80S initiation complex with initiation factor 5B on HCV-IRES RNA."
    Yamamoto H., Unbehaun A., Loerke J., Behrmann E., Collier M., Burger J., Mielke T., Spahn C.M.
    Nat. Struct. Mol. Biol. 21:721-727(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.90 ANGSTROMS) OF 2-211.

Entry informationi

Entry nameiD0VWQ6_CANFA
AccessioniPrimary (citable) accession number: D0VWQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3