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D0VWQ5

- RL19_CANFA

UniProt

D0VWQ5 - RL19_CANFA

Protein

60S ribosomal protein L19

Gene

RPL19

Organism
Canis familiaris (Dog) (Canis lupus familiaris)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: Ensembl

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L19
    Gene namesi
    Name:RPL19
    OrganismiCanis familiaris (Dog) (Canis lupus familiaris)
    Taxonomic identifieri9615 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
    ProteomesiUP000002254: Unplaced

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: Ensembl

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 19619660S ribosomal protein L19PRO_0000405590Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei5 – 51CitrullineBy similarity
    Modified residuei13 – 131PhosphoserineBy similarity
    Modified residuei16 – 161CitrullineBy similarity
    Modified residuei38 – 381CitrullineBy similarity
    Modified residuei187 – 1871PhosphothreonineBy similarity

    Post-translational modificationi

    Citrullinated by PADI4.By similarity

    Keywords - PTMi

    Citrullination, Phosphoprotein

    Proteomic databases

    PaxDbiD0VWQ5.
    PRIDEiD0VWQ5.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2ZKRelectron microscopy8.70798-110[»]
    p1-196[»]
    ProteinModelPortaliD0VWQ5.
    SMRiD0VWQ5. Positions 1-189.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiD0VWQ5.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L19e family.Curated

    Phylogenomic databases

    eggNOGiCOG2147.
    KOiK02885.

    Family and domain databases

    Gene3Di1.10.1200.60. 1 hit.
    1.10.1650.10. 1 hit.
    HAMAPiMF_01475. Ribosomal_L19e.
    InterProiIPR027547. Ribosomal_L19/L19e.
    IPR023638. Ribosomal_L19/L19e_CS.
    IPR000196. Ribosomal_L19/L19e_dom.
    IPR015972. Ribosomal_L19/L19e_dom1.
    IPR015974. Ribosomal_L19/L19e_dom3.
    [Graphical view]
    PfamiPF01280. Ribosomal_L19e. 1 hit.
    [Graphical view]
    SUPFAMiSSF48140. SSF48140. 1 hit.
    PROSITEiPS00526. RIBOSOMAL_L19E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0VWQ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLIKDGLI    50
    IRKPVTVHSR ARCRKNTLAR RKGRHMGIGK RKGTANARMP EKVTWMRRMR 100
    ILRRLLRRYR ESKKIDRHMY HSLYLKVKGN VFKNKRILME HIHKLKADKA 150
    RKKLLADQAE ARRSKTKEAR KRREERLQAK KEEIIKTLSK EEETKK 196
    Length:196
    Mass (Da):23,466
    Last modified:December 15, 2009 - v1
    Checksum:i4AF506393E526216
    GO

    Sequence databases

    RefSeqiXP_005624628.1. XM_005624571.1.
    UniGeneiCfa.47841.

    Genome annotation databases

    GeneIDi403682.
    KEGGicfa:403682.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_005624628.1. XM_005624571.1.
    UniGenei Cfa.47841.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2ZKR electron microscopy 8.70 7 98-110 [» ]
    p 1-196 [» ]
    ProteinModelPortali D0VWQ5.
    SMRi D0VWQ5. Positions 1-189.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi D0VWQ5.
    PRIDEi D0VWQ5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 403682.
    KEGGi cfa:403682.

    Organism-specific databases

    CTDi 6143.

    Phylogenomic databases

    eggNOGi COG2147.
    KOi K02885.

    Miscellaneous databases

    EvolutionaryTracei D0VWQ5.
    NextBioi 20817186.

    Family and domain databases

    Gene3Di 1.10.1200.60. 1 hit.
    1.10.1650.10. 1 hit.
    HAMAPi MF_01475. Ribosomal_L19e.
    InterProi IPR027547. Ribosomal_L19/L19e.
    IPR023638. Ribosomal_L19/L19e_CS.
    IPR000196. Ribosomal_L19/L19e_dom.
    IPR015972. Ribosomal_L19/L19e_dom1.
    IPR015974. Ribosomal_L19/L19e_dom3.
    [Graphical view ]
    Pfami PF01280. Ribosomal_L19e. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48140. SSF48140. 1 hit.
    PROSITEi PS00526. RIBOSOMAL_L19E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence, comparative analysis and haplotype structure of the domestic dog."
      Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R.
      , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
      Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Boxer.
    2. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.70 ANGSTROMS).

    Entry informationi

    Entry nameiRL19_CANFA
    AccessioniPrimary (citable) accession number: D0VWQ5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 8, 2011
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3