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D0VFN3 (D0VFN3_YEASX) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ACY54291.1
Gene names
Name:GAD1 EMBL ACY54291.1 SGD S000004862
Ordered Locus Names:YMR250W SGD S000004862
OrganismSaccharomyces cerevisiae (Baker's yeast) EMBL ACY54291.1
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length585 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D0VFN3 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: DDD22868CEB7B955

FASTA58565,990
        10         20         30         40         50         60 
MLHRHGSKQK NFENIAGKVV HDLAGLQLLS NDVQKSAVQS GHQGSNNMRD TSSQGMANKY 

        70         80         90        100        110        120 
SVPKKGLPAD LSYQLIHNEL TLDGNPHLNL ASFVNTFTTD QARKLIDENL TKNLADNDEY 

       130        140        150        160        170        180 
PQLIELTQRC ISMLAQLWHA NPDEEPIGCA TTGSSEAIML GGLAMKKRWE HRMKNAGKDA 

       190        200        210        220        230        240 
SKPNIIMSSA CQVALEKFTR YFEVECRLVP VSHRSHHMLD PESLWDYVDE NTIGCFVILG 

       250        260        270        280        290        300 
TTYTGHLENV EKVADVLSQI EAKHPDWSNT DIPIHADGAS GGFIIPFGFE KEHMKAYGME 

       310        320        330        340        350        360 
RWGFNHPRVV SMNTSGHKFG LTTPGLGWVL WRDESLLADE LRFKLKYLGG VEETFGLNFS 

       370        380        390        400        410        420 
RPGFQVVHQY FNFVSLGHSG YRTQFQNSLF VARAFSFELL NSSKLPGCFE IVSSIHESIE 

       430        440        450        460        470        480 
NDSAPKSVKD YWEHPQAYKP GVPLVAFKLS KKFHEEYPEV PQAILSSLLR GRGWIIPNYP 

       490        500        510        520        530        540 
LPKATDGSDE KEVLRVVFRS EMKLDLAQLL IVDIESILTK LIHSYEKVCH HIELASEQTP 

       550        560        570        580 
ERKSSFIYEM LLALASPQDD IPTPDEIEKK NKLKETTTRN YRGTC 

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References

[1]"Screening of a high yield gamma-aminobutyricacid yeast from the fruit surface and optimization of its cultural conditions."
Jiang D.H., Li J., Hou J.H., Xu X.B.
Zhejiang Nong Ye Da Xue Xue Bao 20:396-401(2008)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MJ2 EMBL ACY54291.1.
[2]Li J., Jiang D.H., Zhou Q.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MJ2 EMBL ACY54291.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU074586 Genomic DNA. Translation: ACY54291.1.

3D structure databases

ProteinModelPortalD0VFN3.
SMRD0VFN3. Positions 48-521.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbD0VFN3.
PRIDED0VFN3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

SGDS000004862. GAD1.

Phylogenomic databases

eggNOGCOG0076.
PhylomeDBD0VFN3.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0VFN3_YEASX
AccessionPrimary (citable) accession number: D0VFN3
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: June 11, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)