D0VFN3 (D0VFN3_YEASX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Plastid glutamic acid decarboxylase EMBL ACY54291.1
EC=4.1.1.15 EMBL ACY54291.1

Gene names

Name:

GAD1 EMBL ACY54291.1

Organism

Saccharomyces cerevisiae (Baker's yeast) EMBL ACY54291.1

Taxonomic identifier

4932 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	585 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ACY54291.1
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0VFN3 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: DDD22868CEB7B955	FASTA	585	65,990
	10 20 30 40 50 60 MLHRHGSKQK NFENIAGKVV HDLAGLQLLS NDVQKSAVQS GHQGSNNMRD TSSQGMANKY 70 80 90 100 110 120 SVPKKGLPAD LSYQLIHNEL TLDGNPHLNL ASFVNTFTTD QARKLIDENL TKNLADNDEY 130 140 150 160 170 180 PQLIELTQRC ISMLAQLWHA NPDEEPIGCA TTGSSEAIML GGLAMKKRWE HRMKNAGKDA 190 200 210 220 230 240 SKPNIIMSSA CQVALEKFTR YFEVECRLVP VSHRSHHMLD PESLWDYVDE NTIGCFVILG 250 260 270 280 290 300 TTYTGHLENV EKVADVLSQI EAKHPDWSNT DIPIHADGAS GGFIIPFGFE KEHMKAYGME 310 320 330 340 350 360 RWGFNHPRVV SMNTSGHKFG LTTPGLGWVL WRDESLLADE LRFKLKYLGG VEETFGLNFS 370 380 390 400 410 420 RPGFQVVHQY FNFVSLGHSG YRTQFQNSLF VARAFSFELL NSSKLPGCFE IVSSIHESIE 430 440 450 460 470 480 NDSAPKSVKD YWEHPQAYKP GVPLVAFKLS KKFHEEYPEV PQAILSSLLR GRGWIIPNYP 490 500 510 520 530 540 LPKATDGSDE KEVLRVVFRS EMKLDLAQLL IVDIESILTK LIHSYEKVCH HIELASEQTP 550 560 570 580 ERKSSFIYEM LLALASPQDD IPTPDEIEKK NKLKETTTRN YRGTC

References

[1]	"Screening of a high yield gamma-aminobutyricacid yeast from the fruit surface and optimization of its cultural conditions." Jiang D.H., Li J., Hou J.H., Xu X.B. Zhejiang Nong Ye Da Xue Xue Bao 20:396-401(2008) Cited for: NUCLEOTIDE SEQUENCE. Strain: MJ2 EMBL ACY54291.1.
[2]	Li J., Jiang D.H., Zhou Q. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MJ2 EMBL ACY54291.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GU074586 Genomic DNA. Translation: ACY54291.1.
3D structure databases
ProteinModelPortal	D0VFN3.
SMR	D0VFN3. Positions 48-521.
ModBase	Search...
Protein-protein interaction databases
STRING	D0VFN3.
Proteomic databases
PaxDb	D0VFN3.
PRIDE	D0VFN3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	COG0076.
PhylomeDB	D0VFN3.
Gene expression databases
ArrayExpress	D0VFN3.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D0VFN3_YEASX

Accession

Primary (citable) accession number: D0VFN3

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)