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D0RPJ2 (D0RPJ2_9PROT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.8.8 EMBL EMH80334.1
Gene names
ORF Names:HIMB114_00007220 EMBL EMH80334.1
Organismalpha proteobacterium HIMB114 EMBL EMH80334.1
Taxonomic identifier684719 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSAR11 cluster

Protein attributes

Sequence length246 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EMH80334.1

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL EMH80334.1
Chain30 – 246217 Potential EMBL EMH80334.1
PRO_5001120781

Sequences

Sequence LengthMass (Da)Tools
D0RPJ2 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: DD0615D799FF9834

FASTA24627,690
        10         20         30         40         50         60 
MKKIDFRVAL PNLITILGLC LGLNSLKHAF EGDFEKALIF VVLASILDAL DGRIARLIKG 

        70         80         90        100        110        120 
TSKFGAELDS LTDFVNFGVC PGIILYLWIL NSFGFYGWLV SLIFVVACCL RLARFNLDIS 

       130        140        150        160        170        180 
EKIEKNNWKV NFFTGVPAPA AAGLVLLPMI ISFSNFKQII QMEPIVILVI VILVSFLMIS 

       190        200        210        220        230        240 
KIPTYAVKQI KISRSVFILI AMSTVLFFGF LFKNTFETLT VIGFIYLFSI PVSLIHYLKL 


NKRYEK 

« Hide

References

[1]Rappe M., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HIMB114 EMBL EMH80334.1.
[2]Grote J., Thrash C., Huggett M.J., Landry Z., Carini P., Giovannoni S.J., Rappe M.S., Brinkac L., Kim M., Beeson K., Ferriera S., Sutton G., Friedman R., Venter J.C.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HIMB114 EMBL EMH80334.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ADAC02000001 Genomic DNA. Translation: EMH80334.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEY74973; EEY74973; HIMB114_0831.
PATRIC36033898. VBIAlpPro140191_0789.

Family and domain databases

InterProIPR004533. CDP-diaglyc--ser_O-PTrfase.
IPR000462. CDP-OH_P_trans.
[Graphical view]
PfamPF01066. CDP-OH_P_transf. 1 hit.
[Graphical view]
TIGRFAMsTIGR00473. pssA. 1 hit.
PROSITEPS00379. CDP_ALCOHOL_P_TRANSF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0RPJ2_9PROT
AccessionPrimary (citable) accession number: D0RPJ2
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 29, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)