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D0R572 (D0R572_LACJF) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Uncharacterized protein EMBL CAX67235.1
Gene names
Ordered Locus Names:FI9785_1375 EMBL CAX67235.1
OrganismLactobacillus johnsonii (strain FI9785) [Complete proteome] [HAMAP] EMBL CAX67235.1
Taxonomic identifier633699 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus ›

Protein attributes

Sequence length340 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
D0R572 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 4460814D5CF02E55

FASTA34038,512
        10         20         30         40         50         60 
MKVWFGGYTS HDSKGIYTAN VENDGTDIKL TNIKNTVEIE RPTYFQLVGD LLFTIIQKGD 

        70         80         90        100        110        120 
QSGIATYRIK NGEAEKLDTY FHKGAAPCYI SVDPQKHLVF TANYHLATIN VFSYDKNGKL 

       130        140        150        160        170        180 
TFITNDKHEG HGPRVEQDQA HPHFFDETPA GNLVSCDLGI DAVDFYKLDD NRLKHLARYQ 

       190        200        210        220        230        240 
MEKGFGTRHL TFSPDGKTMY IVGELSSQVN VARLNENTWE FEDIATYKTI PDDFTDHNGA 

       250        260        270        280        290        300 
AAIRISKDGK FIYISNRGHD SIAVFKVLDD GKIELAQRIS VFGSFPRDFN WDKAEKYLVV 

       310        320        330        340 
ANQNTNNATL YRRNSETGNL TPIQKDISVP EATRVLFEED

« Hide

References

[1]"Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FI9785 EMBL CAX67235.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN298497 Genomic DNA. Translation: CAX67235.1.
RefSeqYP_003293502.1. NC_013504.1.

3D structure databases

ProteinModelPortalD0R572.
ModBaseSearch...

Protein-protein interaction databases

STRING633699.FI9785_1375.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX67235; CAX67235; FI9785_1375.
GeneID8569903.
KEGGljf:FI9785_1375.
PATRIC32247351. VBILacJoh137736_1303.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2706.
HOGENOMHOG000243565.
KOK07404.

Enzyme and pathway databases

BioCycLJOH633699:GJ95-1308-MONOMER.

Family and domain databases

Gene3D2.130.10.10. 1 hit.
InterProIPR011048. Cyt_cd1_nitrite_Rdtase_haem_C.
IPR019405. Lactonase_7-beta_prop.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamPF10282. Lactonase. 1 hit.
[Graphical view]
SUPFAMSSF51004. Cyt_cd1_haem_C. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD0R572_LACJF
AccessionPrimary (citable) accession number: D0R572
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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