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Protein
Submitted name:

Aminotransferase

Gene

patB

Organism
Lactobacillus johnsonii (strain FI9785)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminotransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Name:patBImported
Ordered Locus Names:FI9785_1293Imported
OrganismiLactobacillus johnsonii (strain FI9785)Imported
Taxonomic identifieri633699 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000002627 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD0R4Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 377Aminotran_1_2InterPro annotationAdd BLAST317

Phylogenomic databases

HOGENOMiHOG000223048.
KOiK14155.
OMAiPVGKVWT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiView protein in InterPro
IPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_sub2.
PfamiView protein in Pfam
PF00155. Aminotran_1_2. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

Sequencei

Sequence statusi: Complete.

D0R4Z0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYDFKTVVN RRHTDSVKWN VKDNELPMSI ADMDFKTAPE IILAIKEKIK
60 70 80 90 100
LGAFGYEEPG KDYFNSVSNW YELEHGAKAE PNWMIFATGV VPAISSIVRR
110 120 130 140 150
VSHIGDNVLV QEPVYNIFYN SIENNGRHVL SNDLIYSNGK YEINWQDLEE
160 170 180 190 200
KLANPLTTLM VFCNPHNPPG IVWKKREVER IASLCQENNV ILLSDEIHGD
210 220 230 240 250
LVRNNVKYTP AFSVAKILRS NVISLVSPSK TFNVASLHAA TVIIPDNNLR
260 270 280 290 300
DIINRGLNID ELAEPNLLAI PATIAAYTEG FNWLHELLAV IDNNFAYVEK
310 320 330 340 350
KITSQLENVK IFSGPATYLM WLDVSKITHD SYKLAAYLRK ETGLIVSAGS
360 370 380
IYRRNGNEFL RINLASPKSM VEDGISRLII GIKKYSKK
Length:388
Mass (Da):43,900
Last modified:December 15, 2009 - v1
Checksum:i9024CD2B67721C1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1.
RefSeqiWP_012846404.1. NC_013504.1.

Genome annotation databases

EnsemblBacteriaiCAX67153; CAX67153; FI9785_1293.
KEGGiljf:FI9785_1293.
PATRICi32247183. VBILacJoh137736_1220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1.
RefSeqiWP_012846404.1. NC_013504.1.

3D structure databases

ProteinModelPortaliD0R4Z0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAX67153; CAX67153; FI9785_1293.
KEGGiljf:FI9785_1293.
PATRICi32247183. VBILacJoh137736_1220.

Phylogenomic databases

HOGENOMiHOG000223048.
KOiK14155.
OMAiPVGKVWT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiView protein in InterPro
IPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_sub2.
PfamiView protein in Pfam
PF00155. Aminotran_1_2. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD0R4Z0_LACJF
AccessioniPrimary (citable) accession number: D0R4Z0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 10, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.