SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D0R4Z0

- D0R4Z0_LACJF

UniProt

D0R4Z0 - D0R4Z0_LACJF

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Aminotransferase
Gene
patB, FI9785_1293
Organism
Lactobacillus johnsonii (strain FI9785)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciLJOH633699:GJ95-1224-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Name:patBImported
Ordered Locus Names:FI9785_1293Imported
OrganismiLactobacillus johnsonii (strain FI9785)Imported
Taxonomic identifieri633699 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002627: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi633699.FI9785_1293.

Structurei

3D structure databases

ProteinModelPortaliD0R4Z0.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1168.
HOGENOMiHOG000223048.
KOiK14155.
OrthoDBiEOG6D8BBF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

Sequencei

Sequence statusi: Complete.

D0R4Z0-1 [UniParc]FASTAAdd to Basket

« Hide

MKYDFKTVVN RRHTDSVKWN VKDNELPMSI ADMDFKTAPE IILAIKEKIK    50
LGAFGYEEPG KDYFNSVSNW YELEHGAKAE PNWMIFATGV VPAISSIVRR 100
VSHIGDNVLV QEPVYNIFYN SIENNGRHVL SNDLIYSNGK YEINWQDLEE 150
KLANPLTTLM VFCNPHNPPG IVWKKREVER IASLCQENNV ILLSDEIHGD 200
LVRNNVKYTP AFSVAKILRS NVISLVSPSK TFNVASLHAA TVIIPDNNLR 250
DIINRGLNID ELAEPNLLAI PATIAAYTEG FNWLHELLAV IDNNFAYVEK 300
KITSQLENVK IFSGPATYLM WLDVSKITHD SYKLAAYLRK ETGLIVSAGS 350
IYRRNGNEFL RINLASPKSM VEDGISRLII GIKKYSKK 388
Length:388
Mass (Da):43,900
Last modified:December 15, 2009 - v1
Checksum:i9024CD2B67721C1D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1.
RefSeqiYP_003293420.1. NC_013504.1.

Genome annotation databases

EnsemblBacteriaiCAX67153; CAX67153; FI9785_1293.
GeneIDi8571019.
KEGGiljf:FI9785_1293.
PATRICi32247183. VBILacJoh137736_1220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1 .
RefSeqi YP_003293420.1. NC_013504.1.

3D structure databases

ProteinModelPortali D0R4Z0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 633699.FI9785_1293.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX67153 ; CAX67153 ; FI9785_1293 .
GeneIDi 8571019.
KEGGi ljf:FI9785_1293.
PATRICi 32247183. VBILacJoh137736_1220.

Phylogenomic databases

eggNOGi COG1168.
HOGENOMi HOG000223048.
KOi K14155.
OrthoDBi EOG6D8BBF.

Enzyme and pathway databases

BioCyci LJOH633699:GJ95-1224-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
    Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
    J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FI9785Imported.

Entry informationi

Entry nameiD0R4Z0_LACJF
AccessioniPrimary (citable) accession number: D0R4Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi