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D0R4Z0

- D0R4Z0_LACJF

UniProt

D0R4Z0 - D0R4Z0_LACJF

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Protein
Submitted name:

Aminotransferase

Gene

patB

Organism
Lactobacillus johnsonii (strain FI9785)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciLJOH633699:GJ95-1224-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Name:patBImported
Ordered Locus Names:FI9785_1293Imported
OrganismiLactobacillus johnsonii (strain FI9785)Imported
Taxonomic identifieri633699 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002627: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi633699.FI9785_1293.

Structurei

3D structure databases

ProteinModelPortaliD0R4Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1168.
HOGENOMiHOG000223048.
KOiK14155.
OrthoDBiEOG6D8BBF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

Sequencei

Sequence statusi: Complete.

D0R4Z0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKYDFKTVVN RRHTDSVKWN VKDNELPMSI ADMDFKTAPE IILAIKEKIK
60 70 80 90 100
LGAFGYEEPG KDYFNSVSNW YELEHGAKAE PNWMIFATGV VPAISSIVRR
110 120 130 140 150
VSHIGDNVLV QEPVYNIFYN SIENNGRHVL SNDLIYSNGK YEINWQDLEE
160 170 180 190 200
KLANPLTTLM VFCNPHNPPG IVWKKREVER IASLCQENNV ILLSDEIHGD
210 220 230 240 250
LVRNNVKYTP AFSVAKILRS NVISLVSPSK TFNVASLHAA TVIIPDNNLR
260 270 280 290 300
DIINRGLNID ELAEPNLLAI PATIAAYTEG FNWLHELLAV IDNNFAYVEK
310 320 330 340 350
KITSQLENVK IFSGPATYLM WLDVSKITHD SYKLAAYLRK ETGLIVSAGS
360 370 380
IYRRNGNEFL RINLASPKSM VEDGISRLII GIKKYSKK
Length:388
Mass (Da):43,900
Last modified:December 15, 2009 - v1
Checksum:i9024CD2B67721C1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1.
RefSeqiYP_003293420.1. NC_013504.1.

Genome annotation databases

EnsemblBacteriaiCAX67153; CAX67153; FI9785_1293.
GeneIDi8571019.
KEGGiljf:FI9785_1293.
PATRICi32247183. VBILacJoh137736_1220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX67153.1 .
RefSeqi YP_003293420.1. NC_013504.1.

3D structure databases

ProteinModelPortali D0R4Z0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 633699.FI9785_1293.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX67153 ; CAX67153 ; FI9785_1293 .
GeneIDi 8571019.
KEGGi ljf:FI9785_1293.
PATRICi 32247183. VBILacJoh137736_1220.

Phylogenomic databases

eggNOGi COG1168.
HOGENOMi HOG000223048.
KOi K14155.
OrthoDBi EOG6D8BBF.

Enzyme and pathway databases

BioCyci LJOH633699:GJ95-1224-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
    Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
    J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FI9785Imported.

Entry informationi

Entry nameiD0R4Z0_LACJF
AccessioniPrimary (citable) accession number: D0R4Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 1, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3