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D0R4Z0

- D0R4Z0_LACJF

UniProt

D0R4Z0 - D0R4Z0_LACJF

Protein
Submitted name:

Aminotransferase

Gene

patB

Organism
Lactobacillus johnsonii (strain FI9785)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Enzyme and pathway databases

    BioCyciLJOH633699:GJ95-1224-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AminotransferaseImported (EC:2.6.1.-Imported)
    Gene namesi
    Name:patBImported
    Ordered Locus Names:FI9785_1293Imported
    OrganismiLactobacillus johnsonii (strain FI9785)Imported
    Taxonomic identifieri633699 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000002627: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi633699.FI9785_1293.

    Structurei

    3D structure databases

    ProteinModelPortaliD0R4Z0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1168.
    HOGENOMiHOG000223048.
    KOiK14155.
    OrthoDBiEOG6D8BBF.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR027619. C_S_lyase_PatB.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D0R4Z0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKYDFKTVVN RRHTDSVKWN VKDNELPMSI ADMDFKTAPE IILAIKEKIK    50
    LGAFGYEEPG KDYFNSVSNW YELEHGAKAE PNWMIFATGV VPAISSIVRR 100
    VSHIGDNVLV QEPVYNIFYN SIENNGRHVL SNDLIYSNGK YEINWQDLEE 150
    KLANPLTTLM VFCNPHNPPG IVWKKREVER IASLCQENNV ILLSDEIHGD 200
    LVRNNVKYTP AFSVAKILRS NVISLVSPSK TFNVASLHAA TVIIPDNNLR 250
    DIINRGLNID ELAEPNLLAI PATIAAYTEG FNWLHELLAV IDNNFAYVEK 300
    KITSQLENVK IFSGPATYLM WLDVSKITHD SYKLAAYLRK ETGLIVSAGS 350
    IYRRNGNEFL RINLASPKSM VEDGISRLII GIKKYSKK 388
    Length:388
    Mass (Da):43,900
    Last modified:December 15, 2009 - v1
    Checksum:i9024CD2B67721C1D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN298497 Genomic DNA. Translation: CAX67153.1.
    RefSeqiYP_003293420.1. NC_013504.1.

    Genome annotation databases

    EnsemblBacteriaiCAX67153; CAX67153; FI9785_1293.
    GeneIDi8571019.
    KEGGiljf:FI9785_1293.
    PATRICi32247183. VBILacJoh137736_1220.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN298497 Genomic DNA. Translation: CAX67153.1 .
    RefSeqi YP_003293420.1. NC_013504.1.

    3D structure databases

    ProteinModelPortali D0R4Z0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 633699.FI9785_1293.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAX67153 ; CAX67153 ; FI9785_1293 .
    GeneIDi 8571019.
    KEGGi ljf:FI9785_1293.
    PATRICi 32247183. VBILacJoh137736_1220.

    Phylogenomic databases

    eggNOGi COG1168.
    HOGENOMi HOG000223048.
    KOi K14155.
    OrthoDBi EOG6D8BBF.

    Enzyme and pathway databases

    BioCyci LJOH633699:GJ95-1224-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR027619. C_S_lyase_PatB.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR04350. C_S_lyase_PatB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
      Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
      J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: FI9785Imported.

    Entry informationi

    Entry nameiD0R4Z0_LACJF
    AccessioniPrimary (citable) accession number: D0R4Z0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3