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D0R4X6 (D0R4X6_LACJF) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124 RuleBase RU004165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding93 – 964ATP By similarity HAMAP-Rule MF_00124

Sites

Active site941Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1511Zinc By similarity HAMAP-Rule MF_00124
Metal binding1541Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124
Metal binding1911Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D0R4X6 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: 8B94962F5C2B3B91

FASTA19922,498
        10         20         30         40         50         60 
MAQLFFRYGA MSSGKSIEIL KVAHNYEAQG RKIALMTSNV DDRSGVGTVA SRIGLHRKAV 

        70         80         90        100        110        120 
PISEDLNLFN YVSELNKSDV ETGNGRVACV LIDEAQFLKR HHVLECAKIV DELKIPVMAF 

       130        140        150        160        170        180 
GLKNDFQNHL FEGSENLLIF ADKVEEMKTI CHYCGHKATM NLRINSGKPV YEGEQVQIGG 

       190 
DESYYPVCRF HYFHPNKQR 

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References

[1]"Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FI9785 EMBL CAX67139.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN298497 Genomic DNA. Translation: CAX67139.1.
RefSeqYP_003293406.1. NC_013504.1.

3D structure databases

ProteinModelPortalD0R4X6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING633699.FI9785_1279.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX67139; CAX67139; FI9785_1279.
GeneID8571171.
KEGGljf:FI9785_1279.
PATRIC32247149. VBILacJoh137736_1205.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1435.
HOGENOMHOG000076391.
KOK00857.
OrthoDBEOG69D3J2.

Enzyme and pathway databases

BioCycLJOH633699:GJ95-1208-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0R4X6_LACJF
AccessionPrimary (citable) accession number: D0R4X6
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)