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D0R3Y3

- D0R3Y3_LACJF

UniProt

D0R3Y3 - D0R3Y3_LACJF

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Lactobacillus johnsonii (strain FI9785)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Note: Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381UniRule annotation
Active sitei575 – 5751UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciLJOH633699:GJ95-864-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:FI9785_926Imported
OrganismiLactobacillus johnsonii (strain FI9785)Imported
Taxonomic identifieri633699 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002627: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi633699.FI9785_926.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0R3Y3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSIKKLENSS DHAMVAEEVK ILTNLLNEST RQLSGDVIFN KIQDLIKISA
60 70 80 90 100
QKDYDTLEKR VANLTNQEMI VVARYFATLP LLVNISEDVE LASEVNLLNN
110 120 130 140 150
TDQDYLGKLE DTIDLVAQKE NANEILKHVN VVPVLTAHPT QVQRKTVLEL
160 170 180 190 200
TDQIHNLLRS YREVKNGTIN QAEWTEKLRA YIEILMQTDI IRSHKLQVSN
210 220 230 240 250
EITNVLAYYP KALIPAITKF TARYQELAEK HNLDLKGATP ITMGMWIGGD
260 270 280 290 300
RDGNPYVTAD TLKLSASLQS QVIFEYYIKK LNKLYRTISM STSYMKTSPA
310 320 330 340 350
VERLSELSND DSPFRTNEPY RRAFYYIESR LLHTEYQLLG TADKNSFVKK
360 370 380 390 400
RDLENLDKIP VYNDPQDFKA DLVTIKESLE QDHDQAVIIS FFTELLEAID
410 420 430 440 450
IFGFHLATID MRQDSSVNEA CVAELLKSAG ICDNYSELPE KDKIKVLLNE
460 470 480 490 500
LNNDPRNLHA NNKPKSELLQ KELKIYKTAR QLKDCIGEDV IKQHIISHTE
510 520 530 540 550
SVSDLLEQAI MLKEYDLLDN QGARIQVVPL FETVEDLENS REIMKEFLNL
560 570 580 590 600
DIVKKWLASQ NDYQEIMLGY SDSNKDGGYL ASCWNLYKAQ KDLTAMGKKL
610 620 630 640 650
GVNITFMHGR GGTVGRGGGP SYEAITAQPF GSINDRIRMT EQGEIIQNKY
660 670 680 690 700
GNRDTAYYNL EMLASATIDR IVSKQIVSED DIGEFRASMD KIVLDSNKVY
710 720 730 740 750
RKLVFETPAF LDYFLQATPI KQISNLNIGS RPAARKKITD FSGLRAIPWV
760 770 780 790 800
FSWSQSRIMF PGWYGVGSAF KHFIDADSHN LDTLQKMYQG WPFFHSLLSN
810 820 830 840 850
VDMVLSKSNM DIAKQYADLC EDEDTKKVFD TIYQEWKLTK EVILQIEGNK
860 870 880 890 900
ELLADNPSLK MSLNYRMPYF NILNYIQVEM IKRDRVDDIA GVYESILPIT
910
INGVTSGLRN SG
Length:912
Mass (Da):104,122
Last modified:December 15, 2009 - v1
Checksum:i63E7F38BA7B7B924
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX66796.1.
RefSeqiYP_003293063.1. NC_013504.1.

Genome annotation databases

EnsemblBacteriaiCAX66796; CAX66796; FI9785_926.
GeneIDi8570679.
KEGGiljf:FI9785_926.
PATRICi32246443. VBILacJoh137736_0853.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN298497 Genomic DNA. Translation: CAX66796.1 .
RefSeqi YP_003293063.1. NC_013504.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 633699.FI9785_926.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAX66796 ; CAX66796 ; FI9785_926 .
GeneIDi 8570679.
KEGGi ljf:FI9785_926.
PATRICi 32246443. VBILacJoh137736_0853.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci LJOH633699:GJ95-864-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry."
    Wegmann U., Overweg K., Horn N., Goesmann A., Narbad A., Gasson M.J., Shearman C.
    J. Bacteriol. 191:7142-7143(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FI9785Imported.

Entry informationi

Entry nameiD0R3Y3_LACJF
AccessioniPrimary (citable) accession number: D0R3Y3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 26, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3