D0NLH6 (D0NLH6_PHYIT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-actinin-1, putative EMBL EEY60523.1

Gene names

ORF Names:

PITG_13237 EMBL EEY60523.1

Organism

Phytophthora infestans (strain T30-4) (Potato late blight fungus) [Reference proteome]

Taxonomic identifier

403677 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Stramenopiles › Oomycetes › Peronosporales › Phytophthora › Phytophthora infestans

Protein attributes

Sequence length	909 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat SAAS SAAS001715
Ligand	Actin-binding SAAS SAAS018159 Calcium SAAS SAAS001715 RuleBase RU000331
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	actin crosslink formation Inferred from electronic annotation. Source: InterPro actin filament bundle assembly Inferred from electronic annotation. Source: InterPro
Molecular_function	calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0NLH6 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: D0BA8342E980CC83	FASTA	909	102,732
	10 20 30 40 50 60 MAGYNEEWVD VQKSTFTRWA NTYLSRKRMT IDDLYEDLKD GIRLISLLQI ICREKVCRKF 70 80 90 100 110 120 NKKPRMRIQK MENLNFAFAF MQKKNVNVTN IGSSDILDGN NKLVLGLMWT LIKAFQVAEI 130 140 150 160 170 180 DVEGVSGKDG LLLWVNRSLA DYPTVEVKNF SSSWADGMAF CALIHRYAPT LLDFNSLNPK 190 200 210 220 230 240 DAQTNVKLAF DIAREKLRIP QLLEVENVAG QAKPDEKSIT TYVSLLFKEF ASGVQKKKAV 250 260 270 280 290 300 TTISKALNIA QRHQELSAEF NKNASGLLEW LQQQTERFQT LSQPRHIPDI KEALARHLEY 310 320 330 340 350 360 KKNEKPPREA QFVAVEGCAG RWIASCKNNG RAVPNLDPPI EKLQALKAQL DELETAFELK 370 380 390 400 410 420 LRQNLESYQK TEIFLKKVVK DLEKVESWAK EKEALSLFAE DLGVTSTADA EEKLESVAFL 430 440 450 460 470 480 QDIELPRYKQ LLATVVSEAD GLSEEHNETK ATLERVEAMK NFVEMAEDKV EGVKIRLQES 490 500 510 520 530 540 LRLQQNMDAV AKDAKTLMRN LKYVIEEMDE EVEAATKLQD VSTAGVVAAK RQFDTVLVPK 550 560 570 580 590 600 VQNAVVSENE KLIAKKQILA EAGRESDVAL IEKTNARVQK LLDSLAEKRG YYEQELATVE 610 620 630 640 650 660 KRDEICREFA NLSARIKERC AQSTQSINVV EGSLKDQFNS MVKLRYRLFR ANTGVALEEE 670 680 690 700 710 720 MEGKPADPEI TGVETSVTQE VAKPAAETVA PESEEGDEAK DAAAEIIVPL TEDMEKLERI 730 740 750 760 770 780 HEELERLQVH TNPFTTDTIH GLRAQFTSLE IAVRDKVKSL EKELALSEVG SLTPEQAKEI 790 800 810 820 830 840 KEVFDHFDLD NDGVLARDEF IMACKGLGLS LSEDDCHDYF DKIDVEDNDE ISFEGFATFC 850 860 870 880 890 900 TLQLQSGSTK DDVHEALDIL TGDELSLEQI QERFDATQVE FIKKHLPELL EADGKSVDTD KFTDFIFSV

References

[1]

"Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans." The Broad Institute Genome Sequencing Platform Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J. , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C. Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T30-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS028145 Genomic DNA. Translation: EEY60523.1.
RefSeq	XP_002899896.1. XM_002899850.1.
UniGene	Pin.9312.
3D structure databases
ProteinModelPortal	D0NLH6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	PITG_13237T0; PITG_13237T0; PITG_13237.
GeneID	9462419.
KEGG	pif:PITG_13237.
Phylogenomic databases
HOGENOM	HOG000180728.
KO	K05699.
Family and domain databases
Gene3D	1.10.238.10. 1 hit. 1.10.418.10. 2 hits.
InterPro	IPR001589. Actinin_actin-bd_CS. IPR026921. Alpha-actinin. IPR001715. CH-domain. IPR011992. EF-hand-like_dom. IPR018247. EF_Hand_1_Ca_BS. IPR002048. EF_hand_dom. IPR018159. Spectrin/alpha-actinin. [Graphical view]
PANTHER	PTHR11915:SF47. PTHR11915:SF47. 1 hit.
Pfam	PF00307. CH. 2 hits. PF13405. EF_hand_4. 1 hit. [Graphical view]
SMART	SM00033. CH. 2 hits. SM00054. EFh. 2 hits. SM00150. SPEC. 2 hits. [Graphical view]
SUPFAM	SSF47576. Calponin-homology. 1 hit.
PROSITE	PS00019. ACTININ_1. 1 hit. PS00020. ACTININ_2. 1 hit. PS50021. CH. 2 hits. PS00018. EF_HAND_1. 1 hit. PS50222. EF_HAND_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0NLH6_PHYIT

Accession

Primary (citable) accession number: D0NLH6

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)