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Protein
Submitted name:

Putative uncharacterized protein

Gene

PITG_12833

Organism
Phytophthora infestans (strain T30-4) (Potato late blight fungus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PITG_12833Imported
OrganismiPhytophthora infestans (strain T30-4) (Potato late blight fungus)Imported
Taxonomic identifieri403677 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesPeronosporalesPhytophthora
ProteomesiUP000006643 Componenti: Partially assembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:PITG_12833.

Interactioni

Protein-protein interaction databases

STRINGi4787.PITG_12833T0.

Structurei

3D structure databases

ProteinModelPortaliD0NL96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231760.
InParanoidiD0NL96.
KOiK00799.

Family and domain databases

Gene3Di1.20.120.550. 1 hit.
InterProiIPR023352. MAPEG-like_dom.
IPR001129. Membr-assoc_MAPEG.
[Graphical view]
PfamiPF01124. MAPEG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0NL96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDANTKVYI ACSSVLYLKF LLATGIQGGK KFRSGGRPPE DAVLSLANTI
60 70 80 90 100
GKGRKQTYGL DKTDDEKVLK AREVEYRWTR IVGNDLESIP FALFIFGGGI
110 120 130 140 150
LAGSNPTVHA GAMTVYTVAR CLHTYVYAHA MQPARGICWG IGVLATLVGV

GNAVVAIL
Length:158
Mass (Da):16,919
Last modified:December 15, 2009 - v1
Checksum:i9A28A705CFE6E8A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS028144 Genomic DNA. Translation: EEY60414.1.
RefSeqiXP_002900210.1. XM_002900164.1.
UniGeneiPin.3803.

Genome annotation databases

EnsemblProtistsiPITG_12833T0; PITG_12833T0; PITG_12833.
GeneIDi9478151.
KEGGipif:PITG_12833.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS028144 Genomic DNA. Translation: EEY60414.1.
RefSeqiXP_002900210.1. XM_002900164.1.
UniGeneiPin.3803.

3D structure databases

ProteinModelPortaliD0NL96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4787.PITG_12833T0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiPITG_12833T0; PITG_12833T0; PITG_12833.
GeneIDi9478151.
KEGGipif:PITG_12833.

Organism-specific databases

EuPathDBiFungiDB:PITG_12833.

Phylogenomic databases

HOGENOMiHOG000231760.
InParanoidiD0NL96.
KOiK00799.

Family and domain databases

Gene3Di1.20.120.550. 1 hit.
InterProiIPR023352. MAPEG-like_dom.
IPR001129. Membr-assoc_MAPEG.
[Graphical view]
PfamiPF01124. MAPEG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans."
    The Broad Institute Genome Sequencing Platform
    Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J.
    , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C.
    Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T30-4Imported.

Entry informationi

Entry nameiD0NL96_PHYIT
AccessioniPrimary (citable) accession number: D0NL96
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.