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Protein
Submitted name:

Putative uncharacterized protein

Gene

PITG_12827

Organism
Phytophthora infestans (strain T30-4) (Potato late blight fungus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PITG_12827Imported
OrganismiPhytophthora infestans (strain T30-4) (Potato late blight fungus)Imported
Taxonomic identifieri403677 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesPeronosporalesPhytophthora
ProteomesiUP000006643 Componenti: Partially assembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:PITG_12827.

Structurei

3D structure databases

ProteinModelPortaliD0NL92.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231760.
InParanoidiD0NL92.
KOiK00799.

Family and domain databases

Gene3Di1.20.120.550. 1 hit.
InterProiIPR023352. MAPEG-like_dom.
IPR001129. Membr-assoc_MAPEG.
[Graphical view]
PfamiPF01124. MAPEG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0NL92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIVNGSVKVY VACTSVLYIK FLTATMIQGA RKYATGARPP EDTWLPSSKR
60 70 80 90 100
KQTFGIDNTN DTKTLEAEKR WEGIVTNDLE SIPLGLFIFG AGIMAGGNSK
110 120 130 140 150
VHFRAMLAFT AARCLHTYAF AYAKQPMRSL CQGVGVVATL VGLGNAVSAI

L
Length:151
Mass (Da):16,280
Last modified:December 15, 2009 - v1
Checksum:iED0684B90FDAEA54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS028144 Genomic DNA. Translation: EEY60410.1.
RefSeqiXP_002900206.1. XM_002900160.1.
UniGeneiPin.2959.

Genome annotation databases

EnsemblProtistsiPITG_12827T0; PITG_12827T0; PITG_12827.
GeneIDi9478147.
KEGGipif:PITG_12827.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS028144 Genomic DNA. Translation: EEY60410.1.
RefSeqiXP_002900206.1. XM_002900160.1.
UniGeneiPin.2959.

3D structure databases

ProteinModelPortaliD0NL92.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiPITG_12827T0; PITG_12827T0; PITG_12827.
GeneIDi9478147.
KEGGipif:PITG_12827.

Organism-specific databases

EuPathDBiFungiDB:PITG_12827.

Phylogenomic databases

HOGENOMiHOG000231760.
InParanoidiD0NL92.
KOiK00799.

Family and domain databases

Gene3Di1.20.120.550. 1 hit.
InterProiIPR023352. MAPEG-like_dom.
IPR001129. Membr-assoc_MAPEG.
[Graphical view]
PfamiPF01124. MAPEG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans."
    The Broad Institute Genome Sequencing Platform
    Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J.
    , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C.
    Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T30-4Imported.

Entry informationi

Entry nameiD0NL92_PHYIT
AccessioniPrimary (citable) accession number: D0NL92
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 22, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.