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D0NB14

- D0NB14_PHYIT

UniProt

D0NB14 - D0NB14_PHYIT

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Protein
Submitted name: Putative uncharacterized protein
Gene
PITG_08606
Organism
Phytophthora infestans (strain T30-4) (Potato late blight fungus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PITG_08606Imported
OrganismiPhytophthora infestans (strain T30-4) (Potato late blight fungus)
Taxonomic identifieri403677 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesPeronosporalesPhytophthora
ProteomesiUP000006643: Partially assembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD0NB14.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000183997.
KOiK01971.
OMAiPTNARTC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF12738. PTCB-BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0NB14-1 [UniParc]FASTAAdd to Basket

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MSIVVFTGTL CQPRKEATAE AEQYGYVVGA RLTKTSSFLI CGAKVGAKKM    50
EEAEKLGVAT LTELEWREKL AATGSVDACS GSEAEVKGFR VQPRMTKATT 100
FLVCGDKAGQ KLKEAEKLGV TVLTEEPSKK RTVAYDEVTG AVNGIKPKQL 150
LVDGTFHDVK SASGSTYIVK RIGMVYSCSC PAWRNQRHPP TSRTCKHLKQ 200
LLGEEFETMR ARGSATAPRG TASAGGGSSR AVAKTTAPKV LLAMKWEREK 250
DDPVGWWISE KLDGVRAFWD SSKKIFLSRL GYEYPAPSWF TAGFPDDVDL 300
DGELFGGRGA FQFTVGIAKT QGSKHWEKLV YKVFDAPSLK TQKFEERMEH 350
AKDVVTKASS KYIEWVEHTM CKSLEHLDEV FNEIEKLGGE GLMIREPGSK 400
YAQGRSSSLL KIKRFHDGEA EVLAYEDGKG KYVGMVGALR CRMSSGKMFK 450
VASGLSDQQR DKPPAIGSII VYKCQELTND GNPRFPVFVG IAADKTRPKD 500
PVIANAMGQE 510
Length:510
Mass (Da):55,991
Last modified:December 15, 2009 - v1
Checksum:iD320555140B297C7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028130 Genomic DNA. Translation: EEY55022.1.
RefSeqiXP_002903967.1. XM_002903921.1.

Genome annotation databases

EnsemblProtistsiPITG_08606T0; PITG_08606T0; PITG_08606.
GeneIDi9462030.
KEGGipif:PITG_08606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028130 Genomic DNA. Translation: EEY55022.1 .
RefSeqi XP_002903967.1. XM_002903921.1.

3D structure databases

ProteinModelPortali D0NB14.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PITG_08606T0 ; PITG_08606T0 ; PITG_08606 .
GeneIDi 9462030.
KEGGi pif:PITG_08606.

Phylogenomic databases

HOGENOMi HOG000183997.
KOi K01971.
OMAi PTNARTC.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF12738. PTCB-BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans."
    The Broad Institute Genome Sequencing Platform
    Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J.
    , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C.
    Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T30-4.

Entry informationi

Entry nameiD0NB14_PHYIT
AccessioniPrimary (citable) accession number: D0NB14
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: June 11, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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