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D0NB14

- D0NB14_PHYIT

UniProt

D0NB14 - D0NB14_PHYIT

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Protein
Submitted name:

Putative uncharacterized protein

Gene

PITG_08606

Organism
Phytophthora infestans (strain T30-4) (Potato late blight fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PITG_08606Imported
OrganismiPhytophthora infestans (strain T30-4) (Potato late blight fungus)Imported
Taxonomic identifieri403677 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesPeronosporalesPhytophthora
ProteomesiUP000006643: Partially assembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD0NB14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000183997.
InParanoidiD0NB14.
KOiK01971.
OMAiPTNARTC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF12738. PTCB-BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0NB14-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSIVVFTGTL CQPRKEATAE AEQYGYVVGA RLTKTSSFLI CGAKVGAKKM
60 70 80 90 100
EEAEKLGVAT LTELEWREKL AATGSVDACS GSEAEVKGFR VQPRMTKATT
110 120 130 140 150
FLVCGDKAGQ KLKEAEKLGV TVLTEEPSKK RTVAYDEVTG AVNGIKPKQL
160 170 180 190 200
LVDGTFHDVK SASGSTYIVK RIGMVYSCSC PAWRNQRHPP TSRTCKHLKQ
210 220 230 240 250
LLGEEFETMR ARGSATAPRG TASAGGGSSR AVAKTTAPKV LLAMKWEREK
260 270 280 290 300
DDPVGWWISE KLDGVRAFWD SSKKIFLSRL GYEYPAPSWF TAGFPDDVDL
310 320 330 340 350
DGELFGGRGA FQFTVGIAKT QGSKHWEKLV YKVFDAPSLK TQKFEERMEH
360 370 380 390 400
AKDVVTKASS KYIEWVEHTM CKSLEHLDEV FNEIEKLGGE GLMIREPGSK
410 420 430 440 450
YAQGRSSSLL KIKRFHDGEA EVLAYEDGKG KYVGMVGALR CRMSSGKMFK
460 470 480 490 500
VASGLSDQQR DKPPAIGSII VYKCQELTND GNPRFPVFVG IAADKTRPKD
510
PVIANAMGQE
Length:510
Mass (Da):55,991
Last modified:December 15, 2009 - v1
Checksum:iD320555140B297C7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028130 Genomic DNA. Translation: EEY55022.1.
RefSeqiXP_002903967.1. XM_002903921.1.

Genome annotation databases

EnsemblProtistsiPITG_08606T0; PITG_08606T0; PITG_08606.
GeneIDi9462030.
KEGGipif:PITG_08606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028130 Genomic DNA. Translation: EEY55022.1 .
RefSeqi XP_002903967.1. XM_002903921.1.

3D structure databases

ProteinModelPortali D0NB14.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PITG_08606T0 ; PITG_08606T0 ; PITG_08606 .
GeneIDi 9462030.
KEGGi pif:PITG_08606.

Phylogenomic databases

HOGENOMi HOG000183997.
InParanoidi D0NB14.
KOi K01971.
OMAi PTNARTC.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF12738. PTCB-BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans."
    The Broad Institute Genome Sequencing Platform
    Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J.
    , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C.
    Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T30-4Imported.

Entry informationi

Entry nameiD0NB14_PHYIT
AccessioniPrimary (citable) accession number: D0NB14
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3