D0NB14 (D0NB14_PHYIT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEY55022.1

Gene names

ORF Names:

PITG_08606 EMBL EEY55022.1

Organism

Phytophthora infestans (strain T30-4) (Potato late blight fungus) [Reference proteome]

Taxonomic identifier

403677 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Stramenopiles › Oomycetes › Peronosporales › Phytophthora › Phytophthora infestans

Protein attributes

Sequence length	510 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0NB14 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: D320555140B297C7	FASTA	510	55,991
	10 20 30 40 50 60 MSIVVFTGTL CQPRKEATAE AEQYGYVVGA RLTKTSSFLI CGAKVGAKKM EEAEKLGVAT 70 80 90 100 110 120 LTELEWREKL AATGSVDACS GSEAEVKGFR VQPRMTKATT FLVCGDKAGQ KLKEAEKLGV 130 140 150 160 170 180 TVLTEEPSKK RTVAYDEVTG AVNGIKPKQL LVDGTFHDVK SASGSTYIVK RIGMVYSCSC 190 200 210 220 230 240 PAWRNQRHPP TSRTCKHLKQ LLGEEFETMR ARGSATAPRG TASAGGGSSR AVAKTTAPKV 250 260 270 280 290 300 LLAMKWEREK DDPVGWWISE KLDGVRAFWD SSKKIFLSRL GYEYPAPSWF TAGFPDDVDL 310 320 330 340 350 360 DGELFGGRGA FQFTVGIAKT QGSKHWEKLV YKVFDAPSLK TQKFEERMEH AKDVVTKASS 370 380 390 400 410 420 KYIEWVEHTM CKSLEHLDEV FNEIEKLGGE GLMIREPGSK YAQGRSSSLL KIKRFHDGEA 430 440 450 460 470 480 EVLAYEDGKG KYVGMVGALR CRMSSGKMFK VASGLSDQQR DKPPAIGSII VYKCQELTND 490 500 510 GNPRFPVFVG IAADKTRPKD PVIANAMGQE

References

[1]

"Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans." The Broad Institute Genome Sequencing Platform Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J. , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C. Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T30-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS028130 Genomic DNA. Translation: EEY55022.1.
RefSeq	XP_002903967.1. XM_002903921.1.
3D structure databases
ProteinModelPortal	D0NB14.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	PITG_08606T0; PITG_08606T0; PITG_08606.
GeneID	9462030.
KEGG	pif:PITG_08606.
Phylogenomic databases
HOGENOM	HOG000183997.
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. IPR007527. Znf_SWIM. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. PS50966. ZF_SWIM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D0NB14_PHYIT

Accession

Primary (citable) accession number: D0NB14

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	March 6, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)