SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D0N315

- D0N315_PHYIT

UniProt

D0N315 - D0N315_PHYIT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Alpha-amylase
Gene
PITG_05526
Organism
Phytophthora infestans (strain T30-4) (Potato late blight fungus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:PITG_05526Imported
OrganismiPhytophthora infestans (strain T30-4) (Potato late blight fungus)
Taxonomic identifieri403677 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesPeronosporalesPhytophthora
ProteomesiUP000006643: Partially assembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000182360.
KOiK01176.
OMAiSSDYPKE.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D0N315-1 [UniParc]FASTAAdd to Basket

« Hide

MSASTSSEYP ASAGWFQYTL PAPQASLEFV FNNGNGVWDN NNNANYKATS    50
AGRWIVMSSV SVPAATKTST PAPTTTPSPS SPASPTPTST RAPTPTTPAP 100
TPSGSCYNYN GIDSCSSSTQ TELPAADDQR KWQTPPRNAS GWSAEYQDYR 150
SLTGYAHVVY GSSRTSATVT VRTYLRVASA SCSYTFNGVK STSPTYQVTN 200
SLKDDLVIVA TCTDGDESWK LELDPVNFVW QNNAVNQPSG MKGGQKGAIV 250
DLFGWPYNDI AQECTDFLGK AGYMGVKINP PQESVLTDAW PQSGQRNPWY 300
FVYQPVSYRL YSRLGTRKQL RTMIQTCRAN GVRVYADAVV NHMSGGGNDV 350
LSHRYSSGGS CVTWGAKSSS KKSPYYTHSF TYGVNAYTNA HPALEFPAVP 400
FGPTDFHCER SMSSWTDPLQ LETGWLSGLT DLNTETTYVR ERIAQYFVDL 450
LGIGFSGLRL DALKHIGPVD TGAIFGLLRK YMGGSSPDDF ISWGEVILGG 500
EASLLACNAN SGYNFYTGLD AEYAANGISS TDIAKLKIWS SDYPKEFPIC 550
GSWILPASRF VIQNDDHDQQ NEGSSSRDMG DSGSVLIKDK DVAKHRSFEV 600
KLFTRTDADW QIKVVLSSYT WFTNGAGGFP DGYSDCSGFD SSQGQKCTAS 650
VPYEKAFRAG SCGYTVDGFA GGKYTRVHRD LSIVNAMRSW VGLSSVKLSD 700
LGITGSC 707
Length:707
Mass (Da):76,711
Last modified:December 15, 2009 - v1
Checksum:i9B7292970E199C46
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028124 Genomic DNA. Translation: EEY69307.1.
RefSeqiXP_002999161.1. XM_002999115.1.

Genome annotation databases

EnsemblProtistsiPITG_05526T0; PITG_05526T0; PITG_05526.
GeneIDi9466091.
KEGGipif:PITG_05526.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS028124 Genomic DNA. Translation: EEY69307.1 .
RefSeqi XP_002999161.1. XM_002999115.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PITG_05526T0 ; PITG_05526T0 ; PITG_05526 .
GeneIDi 9466091.
KEGGi pif:PITG_05526.

Phylogenomic databases

HOGENOMi HOG000182360.
KOi K01176.
OMAi SSDYPKE.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans."
    The Broad Institute Genome Sequencing Platform
    Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A., Baxter L., Beynon J.
    , Boevink P.C., Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S., Nusbaum C.
    Nature 461:393-398(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T30-4.

Entry informationi

Entry nameiD0N315_PHYIT
AccessioniPrimary (citable) accession number: D0N315
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi