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D0MXT4 (D0MXT4_PHYIT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length971 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
D0MXT4 [UniParc].

Last modified December 15, 2009. Version 1.
Checksum: B36315463F7AD926

FASTA971109,708
        10         20         30         40         50         60 
MASVEDAALD QSAALGLSFT ALCSVLKAVE ATRKNDSKLD MLFSSSLRAQ VGGGDLYPLI 

        70         80         90        100        110        120 
RLVLPQLDRE RTYMLKEKKI AKIYIDVLGL APISKDAQKL EHFNDPKIVD SKSVGDFAAV 

       130        140        150        160        170        180 
LFDVVLYQSA RTKSKTHHTL EDVNTLLDRL VQADNNAARK KVFMKLATEY SADEQKWIIR 

       190        200        210        220        230        240 
VILKDLKIGL RHERVLKFIH PDAMEMYNHT NDLHKVCKEL RNSAVRYVPQ LEPFQVFTPM 

       250        260        270        280        290        300 
LAKRVNFGEC ISAINADAFV MEPKLDGERI TCHVQGKEVQ FISRNGINYT ENYAPSIKPH 

       310        320        330        340        350        360 
VLSQLEPGID CILDGEMMVW DNTEYRLREF GLLKNTANAV RKGEATNRWL CYVVWDVVYV 

       370        380        390        400        410        420 
GGGPKAEQLI REVFKDPGEI SAVMGLPLHA RRKLLLRILK PLDHRIIIIE QKLVNDKSAK 

       430        440        450        460        470        480 
ERHEKVMAEV DQQVSNGGEG VIMKDLNAHY MCGESSRKAK KWLKLKPDYA GMTTDLDVII 

       490        500        510        520        530        540 
VGGFYGTGRR RSGNVSVFLL GVLAHSLDEK KAAEATKPGA ACPVVYTFAK VGTGYNLEEL 

       550        560        570        580        590        600 
EQMRQELEPY WQPWDDDNVP SHLNGWKPQK SDLRPDVWID PRHSKILEVY GFELSFTTLY 

       610        620        630        640        650        660 
QTGLTIRFPR CKAIRNDKEW YQCIDLQDLN AARGSLSTKR ASEVALGQKS ATKRIKKRQT 

       670        680        690        700        710        720 
VSARRPNGVL QDYSRADLEG IEQERNVFEG MEFCVLPGKY QKPPQDLASS FPDGIFEKNA 

       730        740        750        760        770        780 
MQLSKQTVEK LLHSFGGAIV QNPIAGSTHY VVAAGDSGFK VVNLKKQGLF NVVHIRWVFN 

       790        800        810        820        830        840 
CIVASRLVSL KAGDFISATD LQRQLLAKEY DRYGDHFTEH VTPDDLRRIL QELSSASERK 

       850        860        870        880        890        900 
HTSLPWQFKL KELEMEEAEA MDSAFTFLAH CVVYFHNSSS SEDKDIDVLA MGQMKLIEQQ 

       910        920        930        940        950        960 
LKLYGGVVAR EIDSSATHVV ADPAQVEQLA PAIRNLRHQG LPEPRVVTKE WVQECVEQRT 

       970 
QVPDNNFVVH V 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS028121 Genomic DNA. Translation: EEY65982.1.
RefSeqXP_002906581.1. XM_002906535.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsPITG_03514T0; PITG_03514T0; PITG_03514.
GeneID9467476.
KEGGpif:PITG_03514.

Phylogenomic databases

HOGENOMHOG000179646.
KOK10777.
OMAHMCPSTK.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD0MXT4_PHYIT
AccessionPrimary (citable) accession number: D0MXT4
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)