D0MJW9 (D0MJW9_RHOM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit EMBL ACY48777.1

Gene names

Ordered Locus Names:

Rmar_1894 EMBL ACY48777.1

Organism

Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis) [Complete proteome] [HAMAP] EMBL ACY48777.1

Taxonomic identifier

518766 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Rhodothermus › Rhodothermus marinus

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D0MJW9 [UniParc]. Last modified December 15, 2009. Version 1. Checksum: B9A97B9D5384ECF6	FASTA	377	41,246
	10 20 30 40 50 60 MDTRLEVVYR LEVPSEEQGT FARALLLEQT VETPEEVALR VPVVRERLMG EIVELEPLEA 70 80 90 100 110 120 GGARLVLQLP VETAGVDPAQ FVNVLFGNAS LHEQVILEDF ELPPALFDRF PGPRFGIEGV 130 140 150 160 170 180 RALLGVHDRP LTASALKPVG LSVDELAVLC RSLAEGGIDV IKDDHYWADH PFAPFEERVR 190 200 210 220 230 240 RCQEVVQEVS ARTGRRVVYA PSLSGTPSQV LRQAEIAQQC GVGAVLLAPM LLGLPFFYEL 250 260 270 280 290 300 VTRHLEVPVL AHPSFAGAQR ILPETLLGKL FRLYGADMII FPSFGGRFSY SRATCRALAE 310 320 330 340 350 360 RARQPWGPYR PALPVPAGGM QVERARELVE FFGRDVMLLI GGSLLRAHPG PELTARARAL 370 VESVAEAAAA LSDPDLA

References

[1]

"Complete genome sequence of Rhodothermus marinus type strain (R-10)." Nolan M., Tindall B.J., Pomrenke H., Lapidus A., Copeland A., Glavina Del Rio T., Lucas S., Chen F., Tice H., Cheng J.-F., Saunders E., Han C., Bruce D., Goodwin L., Chain P., Pitluck S., Pati A., Ivanova N. , Mavromatis K., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.-J., Jeffries C.D., Brettin T., Goeker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P., Detter J.C. Stand. Genomic Sci. 1:283-290(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43812 / DSM 4252 / R-10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001807 Genomic DNA. Translation: ACY48777.1.
RefSeq	YP_003291165.1. NC_013501.1.
3D structure databases
ProteinModelPortal	D0MJW9.
ModBase	Search...
Protein-protein interaction databases
STRING	518766.Rmar_1894.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACY48777; ACY48777; Rmar_1894.
GeneID	8568548.
KEGG	rmr:Rmar_1894.
PATRIC	32317891. VBIRhoMar93821_1912.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230274.
KO	K01601.
Enzyme and pathway databases
BioCyc	RMAR518766:GJJ8-1929-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 2 hits. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D0MJW9_RHOM4

Accession

Primary (citable) accession number: D0MJW9

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2009
Last sequence update:	December 15, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)