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Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Rmar_1427

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-1459-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AMP-dependent synthetase and ligaseImported
Gene namesi
Ordered Locus Names:Rmar_1427Imported
OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
Taxonomic identifieri518766 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
ProteomesiUP000002221 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi518766.Rmar_1427.

Structurei

3D structure databases

ProteinModelPortaliD0MIK6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229981.
KOiK01895.
OrthoDBiEOG68WR2H.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0MIK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIGSAFSLT TGTFPFNQPV VWEPRPEWIA ASNLQRFMNR HGIGSLDELQ
60 70 80 90 100
ARSVDDPEWF WPAVLEDLDI RFYRPYTRIL DLSEGPAFPR WCVGGQLNIV
110 120 130 140 150
HNLLDKWQET DAAERIALRW EGEEGTLRTL TYAGLHAEVC RCARALQSLG
160 170 180 190 200
FQKGDVAALF MPMTPELVIA FLAVIKLGGI VLPLFSGYGA EAVRTRIRDA
210 220 230 240 250
EARFLFTADG FYRRGRPVYL KPVADEALAN CPSVQHVIVY RRMEADNVPV
260 270 280 290 300
PMLPGRDHWW HELVWPQPAE AETVRTDAED VLMVIYTSGT TGRPKGAVHT
310 320 330 340 350
HCGFPVKAAQ DMYQCMDLKP GETMYWVTDM GWMMGPWLVF GTLLIGATMV
360 370 380 390 400
LYDGAPDYPD VDRLWGLVEQ HRVTHLGISP TLIRALRPHG PEPIRRHDLS
410 420 430 440 450
SLRAVGSTGS PWDPESWLWC FEHVLGREKP ILNYSGGTEI SGGILCGNFF
460 470 480 490 500
RPLKPCAFSG PVPGMAADVV DEQGRPVREA VGELVIRKPW IGMTRGFWRD
510 520 530 540 550
RERYLDTYWR RIEGLWVHGD FAAIDRDGLW YILGRSDDTI KVAGKRVGPA
560 570 580 590 600
EVEAILNAHE AVAESAAIGV PHEVKGEEVV AFVVLKPGVS PSEELRRELI
610 620 630 640 650
ERVVAALGKP LKPREIRFTT ALPKTRNAKI MRRVIRAAYL GQDPGDVSSL
660
EDPAAVEAIR QAV
Length:663
Mass (Da):74,251
Last modified:December 15, 2009 - v1
Checksum:iE138E2CC912A6C74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001807 Genomic DNA. Translation: ACY48314.1.
RefSeqiWP_012843925.1. NC_013501.1.
YP_003290702.1. NC_013501.1.

Genome annotation databases

EnsemblBacteriaiACY48314; ACY48314; Rmar_1427.
KEGGirmr:Rmar_1427.
PATRICi32316949. VBIRhoMar93821_1443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001807 Genomic DNA. Translation: ACY48314.1.
RefSeqiWP_012843925.1. NC_013501.1.
YP_003290702.1. NC_013501.1.

3D structure databases

ProteinModelPortaliD0MIK6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi518766.Rmar_1427.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY48314; ACY48314; Rmar_1427.
KEGGirmr:Rmar_1427.
PATRICi32316949. VBIRhoMar93821_1443.

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229981.
KOiK01895.
OrthoDBiEOG68WR2H.

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-1459-MONOMER.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43812 / DSM 4252 / R-10Imported.

Entry informationi

Entry nameiD0MIK6_RHOM4
AccessioniPrimary (citable) accession number: D0MIK6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: April 1, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.