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D0MIK6

- D0MIK6_RHOM4

UniProt

D0MIK6 - D0MIK6_RHOM4

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Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Rmar_1427

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRMAR518766:GJJ8-1459-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AMP-dependent synthetase and ligaseImported
Gene namesi
Ordered Locus Names:Rmar_1427Imported
OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
Taxonomic identifieri518766 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
ProteomesiUP000002221: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi518766.Rmar_1427.

Structurei

3D structure databases

ProteinModelPortaliD0MIK6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229981.
KOiK01895.
OrthoDBiEOG68WR2H.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D0MIK6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQIGSAFSLT TGTFPFNQPV VWEPRPEWIA ASNLQRFMNR HGIGSLDELQ
60 70 80 90 100
ARSVDDPEWF WPAVLEDLDI RFYRPYTRIL DLSEGPAFPR WCVGGQLNIV
110 120 130 140 150
HNLLDKWQET DAAERIALRW EGEEGTLRTL TYAGLHAEVC RCARALQSLG
160 170 180 190 200
FQKGDVAALF MPMTPELVIA FLAVIKLGGI VLPLFSGYGA EAVRTRIRDA
210 220 230 240 250
EARFLFTADG FYRRGRPVYL KPVADEALAN CPSVQHVIVY RRMEADNVPV
260 270 280 290 300
PMLPGRDHWW HELVWPQPAE AETVRTDAED VLMVIYTSGT TGRPKGAVHT
310 320 330 340 350
HCGFPVKAAQ DMYQCMDLKP GETMYWVTDM GWMMGPWLVF GTLLIGATMV
360 370 380 390 400
LYDGAPDYPD VDRLWGLVEQ HRVTHLGISP TLIRALRPHG PEPIRRHDLS
410 420 430 440 450
SLRAVGSTGS PWDPESWLWC FEHVLGREKP ILNYSGGTEI SGGILCGNFF
460 470 480 490 500
RPLKPCAFSG PVPGMAADVV DEQGRPVREA VGELVIRKPW IGMTRGFWRD
510 520 530 540 550
RERYLDTYWR RIEGLWVHGD FAAIDRDGLW YILGRSDDTI KVAGKRVGPA
560 570 580 590 600
EVEAILNAHE AVAESAAIGV PHEVKGEEVV AFVVLKPGVS PSEELRRELI
610 620 630 640 650
ERVVAALGKP LKPREIRFTT ALPKTRNAKI MRRVIRAAYL GQDPGDVSSL
660
EDPAAVEAIR QAV
Length:663
Mass (Da):74,251
Last modified:December 15, 2009 - v1
Checksum:iE138E2CC912A6C74
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001807 Genomic DNA. Translation: ACY48314.1.
RefSeqiWP_012843925.1. NC_013501.1.
YP_003290702.1. NC_013501.1.

Genome annotation databases

EnsemblBacteriaiACY48314; ACY48314; Rmar_1427.
GeneIDi8568078.
KEGGirmr:Rmar_1427.
PATRICi32316949. VBIRhoMar93821_1443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001807 Genomic DNA. Translation: ACY48314.1 .
RefSeqi WP_012843925.1. NC_013501.1.
YP_003290702.1. NC_013501.1.

3D structure databases

ProteinModelPortali D0MIK6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 518766.Rmar_1427.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY48314 ; ACY48314 ; Rmar_1427 .
GeneIDi 8568078.
KEGGi rmr:Rmar_1427.
PATRICi 32316949. VBIRhoMar93821_1443.

Phylogenomic databases

eggNOGi COG0365.
HOGENOMi HOG000229981.
KOi K01895.
OrthoDBi EOG68WR2H.

Enzyme and pathway databases

BioCyci RMAR518766:GJJ8-1459-MONOMER.

Family and domain databases

InterProi IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view ]
Pfami PF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view ]
PROSITEi PS00455. AMP_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43812 / DSM 4252 / R-10Imported.

Entry informationi

Entry nameiD0MIK6_RHOM4
AccessioniPrimary (citable) accession number: D0MIK6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3