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D0MIK6

- D0MIK6_RHOM4

UniProt

D0MIK6 - D0MIK6_RHOM4

Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Rmar_1427

Organism
Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ligase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRMAR518766:GJJ8-1459-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AMP-dependent synthetase and ligaseImported
    Gene namesi
    Ordered Locus Names:Rmar_1427Imported
    OrganismiRhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis)Imported
    Taxonomic identifieri518766 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
    ProteomesiUP000002221: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi518766.Rmar_1427.

    Structurei

    3D structure databases

    ProteinModelPortaliD0MIK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0365.
    HOGENOMiHOG000229981.
    KOiK01895.
    OrthoDBiEOG68WR2H.

    Family and domain databases

    InterProiIPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view]
    PfamiPF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view]
    PROSITEiPS00455. AMP_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D0MIK6-1 [UniParc]FASTAAdd to Basket

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    MQIGSAFSLT TGTFPFNQPV VWEPRPEWIA ASNLQRFMNR HGIGSLDELQ    50
    ARSVDDPEWF WPAVLEDLDI RFYRPYTRIL DLSEGPAFPR WCVGGQLNIV 100
    HNLLDKWQET DAAERIALRW EGEEGTLRTL TYAGLHAEVC RCARALQSLG 150
    FQKGDVAALF MPMTPELVIA FLAVIKLGGI VLPLFSGYGA EAVRTRIRDA 200
    EARFLFTADG FYRRGRPVYL KPVADEALAN CPSVQHVIVY RRMEADNVPV 250
    PMLPGRDHWW HELVWPQPAE AETVRTDAED VLMVIYTSGT TGRPKGAVHT 300
    HCGFPVKAAQ DMYQCMDLKP GETMYWVTDM GWMMGPWLVF GTLLIGATMV 350
    LYDGAPDYPD VDRLWGLVEQ HRVTHLGISP TLIRALRPHG PEPIRRHDLS 400
    SLRAVGSTGS PWDPESWLWC FEHVLGREKP ILNYSGGTEI SGGILCGNFF 450
    RPLKPCAFSG PVPGMAADVV DEQGRPVREA VGELVIRKPW IGMTRGFWRD 500
    RERYLDTYWR RIEGLWVHGD FAAIDRDGLW YILGRSDDTI KVAGKRVGPA 550
    EVEAILNAHE AVAESAAIGV PHEVKGEEVV AFVVLKPGVS PSEELRRELI 600
    ERVVAALGKP LKPREIRFTT ALPKTRNAKI MRRVIRAAYL GQDPGDVSSL 650
    EDPAAVEAIR QAV 663
    Length:663
    Mass (Da):74,251
    Last modified:December 15, 2009 - v1
    Checksum:iE138E2CC912A6C74
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001807 Genomic DNA. Translation: ACY48314.1.
    RefSeqiWP_012843925.1. NC_013501.1.
    YP_003290702.1. NC_013501.1.

    Genome annotation databases

    EnsemblBacteriaiACY48314; ACY48314; Rmar_1427.
    GeneIDi8568078.
    KEGGirmr:Rmar_1427.
    PATRICi32316949. VBIRhoMar93821_1443.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001807 Genomic DNA. Translation: ACY48314.1 .
    RefSeqi WP_012843925.1. NC_013501.1.
    YP_003290702.1. NC_013501.1.

    3D structure databases

    ProteinModelPortali D0MIK6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 518766.Rmar_1427.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY48314 ; ACY48314 ; Rmar_1427 .
    GeneIDi 8568078.
    KEGGi rmr:Rmar_1427.
    PATRICi 32316949. VBIRhoMar93821_1443.

    Phylogenomic databases

    eggNOGi COG0365.
    HOGENOMi HOG000229981.
    KOi K01895.
    OrthoDBi EOG68WR2H.

    Enzyme and pathway databases

    BioCyci RMAR518766:GJJ8-1459-MONOMER.

    Family and domain databases

    InterProi IPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view ]
    Pfami PF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view ]
    PROSITEi PS00455. AMP_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43812 / DSM 4252 / R-10Imported.

    Entry informationi

    Entry nameiD0MIK6_RHOM4
    AccessioniPrimary (citable) accession number: D0MIK6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3